RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 UBDO15205 165 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PFDN6O15212 129 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SURF4O15260 269 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CXCL13O43927 109 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SOX30O94993 753 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 LYPD3O95274 346 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CNIH1O95406 144 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CLIC3O95833 236 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PPBPP02775 128 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TYMSP04818 313 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TFAP2AP05549 437 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 IGHV4-31P0DP07 118 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 HIST1H1EP10412 219 aaKnown RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 LIPCP11150 499 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 FGF3P11487 239 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 GM2AP17900 193 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 IGFBP3P17936 291 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CELP19835 753 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 GDF1P27539 372 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ADORA1P30542 326 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 FGF9P31371 208 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PMELP40967 661 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLCO1A2P46721 670 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 YAP1P46937 504 aaKnown RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PPOXP50336 477 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PEX3P56589 373 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 FBXW4P57775 412 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF121P58317 390 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TAS2R31P59538 309 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PAFAH1B2P68402 229 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF45Q02386 682 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 POU3F1Q03052 451 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 LTBQ06643 244 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 GNMTQ14749 295 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 POU6F1Q14863 301 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 GUSBP1Q15486 140 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUSP6Q16828 381 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TBC1D28Q2M2D7 210 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF585BQ52M93 769 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 C10orf25Q5T742 122 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CPTPQ5TA50 214 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF549Q6P9A3 640 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 C5orf46Q6UWT4 87 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 FAM131AQ6UXB0 335 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SH2D5Q6ZV89 423 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CREB3L2Q70SY1 520 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ISCA2Q86U28 154 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 DND1Q8IYX4 353 aaKnown RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PGBD5Q8N414 524 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 GVQW1Q8N7I0 195 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 MAPKAPK5-AS1Q8N8E1 139 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 WDR31Q8NA23 367 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR2T12Q8NG77 320 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR7A2PQ8NGA2 310 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 FAM45AQ8TCE6 357 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM255BQ8WV15 326 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 DNASE2BQ8WZ79 361 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 DYRK2Q92630 601 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 RASL10AQ92737 203 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 UFD1Q92890 307 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 RAB8BQ92930 207 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TESCQ96BS2 214 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TCEAL4Q96EI5 215 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 KCTD7Q96MP8 289 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SEC22CQ9BRL7 303 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM59Q9BXS4 323 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CHIAQ9BZP6 476 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 HOXD1Q9GZZ0 328 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CSTL1Q9H114 145 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 C11orf49Q9H6J7 331 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 C6orf50Q9HD87 102 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 KRCC1Q9NPI7 259 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SDR39U1Q9NRG7 319 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF107Q9UII5 783 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC7A7Q9UM01 511 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ACOT9Q9Y305 439 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TCF20Q9UGU0 1960 aaKnown RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ABCC11Q96J66 1382 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 NEDD4P46934 1319 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 A0A087WZ39 114 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZCWPW2A0A1B0GU75 182 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 GJE1A6NN92 205 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 IDSB3KWA1 339 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 BET1O15155 118 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 NUPL2O15504 423 aaKnown RBP3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 PHF1O43189 567 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 ERI3O43414 337 aaKnown RBP3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 CDC40O60508 579 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 WDR1O75083 606 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 SNAP29O95721 258 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 APOC1P02654 83 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR8U9P0C7N5 309 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 CDH1P12830 882 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 ADRB3P13945 408 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 GTF2F2P13984 249 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 GFAPP14136 432 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 MYOD1P15172 320 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 COX5AP20674 150 aa3.04□□□□□ -1.92
HMGB1P12-201ENST00000438594 GNLYP22749 145 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms