RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ZFP62Q8NB50 900 aaPredicted RBP18.69■□□□□ 0.58
PTPRF-207ENST00000436724 OR10S1Q8NGN2 331 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 HAVCR2Q8TDQ0 301 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 DERL3Q96Q80 235 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 SF3B5Q9BWJ5 86 aaKnown RBP18.69■□□□□ 0.58
PTPRF-207ENST00000436724 POLR1DQ9Y2S0 133 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 TFECO14948 347 aaPredicted RBP18.69■□□□□ 0.58
PTPRF-207ENST00000436724 SLC2A2P11168 524 aaPredicted RBP18.69■□□□□ 0.58
PTPRF-207ENST00000436724 SPINK2P20155 84 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 EVX1P49640 407 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 SFXN4Q6P4A7 337 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 ASB18Q6ZVZ8 466 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 TPRA1Q86W33 373 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 TMEM54Q969K7 222 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 SLAMF6Q96DU3 332 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 ZNF837Q96EG3 531 aaPredicted RBP18.69■□□□□ 0.58
PTPRF-207ENST00000436724 SCMH1Q96GD3 660 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 ASH2LQ9UBL3 628 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 EMC9Q9Y3B6 208 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 AK6Q9Y3D8 172 aaKnown RBP18.69■□□□□ 0.58
PTPRF-207ENST00000436724 LIPGQ9Y5X9 500 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 TMEM212A6NML5 194 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 HSPB2A8KAH6 182 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 EFSO43281 561 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 RAB3BP20337 219 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 KIR2DL3P43628 341 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 HSPB2Q16082 182 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 CEP78Q5JTW2 689 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 RNF133Q8WVZ7 376 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 CAPSLQ8WWF8 208 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 COMMD4Q9H0A8 199 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 TP63Q9H3D4 680 aaPredicted RBP18.68■□□□□ 0.58
PTPRF-207ENST00000436724 FOXD3Q9UJU5 478 aaPredicted RBP18.68■□□□□ 0.58
PTPRF-207ENST00000436724 TRAV1-2A0A0B4J238 106 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 HMX3A6NHT5 357 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 LINC01387J3KSC0 135 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 SRMP19623 302 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 PMP22Q01453 160 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 RASGEF1BQ0VAM2 473 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 P2RY14Q15391 338 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 C3AR1Q16581 482 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 Q499Y3 187 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 ABLIM2Q6H8Q1 611 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 FDX2Q6P4F2 183 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.68■□□□□ 0.58
PTPRF-207ENST00000436724 UBE2J2Q8N2K1 259 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 CPNE4Q96A23 557 aaPredicted RBP18.68■□□□□ 0.58
PTPRF-207ENST00000436724 DEFB127Q9H1M4 99 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 GDF2Q9UK05 429 aaPredicted RBP18.68■□□□□ 0.58
PTPRF-207ENST00000436724 KLK13Q9UKR3 277 aa18.68■□□□□ 0.58
PTPRF-207ENST00000436724 DMXL2Q8TDJ6 3036 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 SRSF10O75494 262 aaKnown RBP18.67■□□□□ 0.58
PTPRF-207ENST00000436724 THBS2P35442 1172 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 DDOSTP39656 456 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 NHLH1Q02575 133 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 SGCAQ16586 387 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 HYAL4Q2M3T9 481 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 METAP1DQ6UB28 335 aaPredicted RBP18.67■□□□□ 0.58
PTPRF-207ENST00000436724 FCRLAQ7L513 359 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 RBM24Q9BX46 236 aaKnown RBP18.67■□□□□ 0.58
PTPRF-207ENST00000436724 C1orf198Q9H425 327 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 BRD7Q9NPI1 651 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 MALT1Q9UDY8 824 aa18.67■□□□□ 0.58
PTPRF-207ENST00000436724 NCOA6Q14686 2063 aaPredicted RBP18.67■□□□□ 0.58
PTPRF-207ENST00000436724 RER1O15258 196 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 PAHP00439 452 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 HLA-DQB1P01920 261 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 H2BFMP0C1H6 154 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 ZNF708P17019 499 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 CATSPERDQ86XM0 798 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 TRBV5-5A0A0J9YX44 114 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 ZNF891A8MT65 544 aaPredicted RBP18.66■□□□□ 0.58
PTPRF-207ENST00000436724 A8MV72 311 aaPredicted RBP18.66■□□□□ 0.58
PTPRF-207ENST00000436724 ZNF254O75437 659 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 UTS2BQ765I0 119 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.66■□□□□ 0.58
PTPRF-207ENST00000436724 SLC7A5P1Q8MH63 180 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 TMEM178AQ8NBL3 297 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 ULBP2Q9BZM5 246 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 R4GMQ9 66 aa18.66■□□□□ 0.58
PTPRF-207ENST00000436724 A0A0B4J203 849 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 CCR9P51686 369 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 SLC10A1Q14973 349 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 C10orf128Q5T292 105 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 C20orf196Q8IYI0 205 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 Q8N402 240 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 OR2AJ1Q8NGZ0 328 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 GPR148Q8TDV2 347 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 TMEM106AQ96A25 262 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 GFI1Q99684 422 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 ZNF416Q9BWM5 594 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 KCNMB2Q9Y691 235 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 A0A0B4J293 547 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 TMEM269A0A1B0GVZ9 245 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 DHHO43323 396 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 CYTIPO60759 359 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 CFL1P23528 166 aaKnown RBP18.65■□□□□ 0.58
PTPRF-207ENST00000436724 TBRG1Q3YBR2 411 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 PDSS1Q5T2R2 415 aa18.65■□□□□ 0.58
PTPRF-207ENST00000436724 FAM109AQ8N4B1 249 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms