RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 C19orf18Q8NEA5 215 aa12□□□□□ -0.49
SMARCE1-205ENST00000431889 OR52J3Q8NH60 311 aa12□□□□□ -0.49
SMARCE1-205ENST00000431889 ZFAND2BQ8WV99 257 aa12□□□□□ -0.49
SMARCE1-205ENST00000431889 DVL3Q92997 716 aaPredicted RBP12□□□□□ -0.49
SMARCE1-205ENST00000431889 FAM162AQ96A26 154 aa12□□□□□ -0.49
SMARCE1-205ENST00000431889 CYSLTR2Q9NS75 346 aa12□□□□□ -0.49
SMARCE1-205ENST00000431889 IER3IP1Q9Y5U9 82 aa12□□□□□ -0.49
SMARCE1-205ENST00000431889 PRSS37A4D1T9 235 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 GMNCA6NCL1 334 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 J3QLI3 93 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 FSHBP01225 129 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 CD55P08174 381 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 CD14P08571 375 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 NR2C1P13056 603 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 COX4I1P13073 169 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 GSTM3P21266 225 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 GSK3BP49841 420 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 KRR1Q13601 381 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 ARMCX4Q5H9R4 360 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 USP43Q70EL4 1123 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 CBLL1Q75N03 491 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 RRM2BQ7LG56 351 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 FAM86B1Q8N7N1 296 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 SLC7A13Q8TCU3 470 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 SIGLEC11Q96RL6 698 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 RBM4Q9BWF3 364 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 NUAK2Q9H093 628 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 NMNAT1Q9HAN9 279 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 DDX28Q9NUL7 540 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 ARGLU1Q9NWB6 273 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 NDRG4Q9ULP0 352 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 PPP1R3CQ9UQK1 317 aa11.99□□□□□ -0.49
SMARCE1-205ENST00000431889 TRBV4-1A0A0J9YWV2 114 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 DCTN6O00399 190 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 FOXH1O75593 365 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 LIPAP38571 399 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 CDKN2AP42771 156 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 SLC6A9P48067 706 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 COMPP49747 757 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 FXYD6P3P58550 94 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 BTG1P62324 171 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 SLC3A1Q07837 685 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 SCRN3Q0VDG4 424 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 ZNF154Q13106 437 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 SEC23BQ15437 767 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 FAM205BPQ63HN1 556 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 ARL9Q6T311 187 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 TREML1Q86YW5 311 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 KLHL36Q8N4N3 616 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 RNF148Q8N7C7 305 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 GPA33Q99795 319 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 FN3KQ9H479 309 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 PATZ1Q9HBE1 687 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 TRRAPQ9Y4A5 3859 aa11.98□□□□□ -0.49
SMARCE1-205ENST00000431889 DNAJC9-AS1A6NH13 148 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 F5H5P2 479 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 KCNAB3O43448 404 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 PPP1R3DO95685 299 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 HLA-DPB1P04440 258 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 ADH4P08319 380 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 IGHV4-38-2P0DP08 117 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 TNFSF4P23510 183 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 FPR2P25090 351 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 NUDT2P50583 147 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 MMP16P51512 607 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 ZMAT1Q5H9K5 638 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 TMPRSS11FQ6ZWK6 438 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 LINC00346Q8IVM7 164 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 ZNF283Q8N7M2 679 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 FAM156AQ8NDB6 213 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 FNDC8Q8TC99 324 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 SAMD8Q96LT4 415 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 JMJD8Q96S16 334 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 GCM1Q9NP62 436 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 TNFRSF19Q9NS68 423 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 ZNF446Q9NWS9 450 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 RPS6KA6Q9UK32 745 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 SIGLEC7Q9Y286 467 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 POLR1DQ9Y2S0 133 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 AUP1Q9Y679 476 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 PKD1L1Q8TDX9 2849 aa11.97□□□□□ -0.49
SMARCE1-205ENST00000431889 CEACAM18A8MTB9 384 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 ICMTO60725 284 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 PTP4A3O75365 173 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 KHDRBS3O75525 346 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 KITLGP21583 273 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 AQP6Q13520 282 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 SYT9Q86SS6 491 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 NAA40Q86UY6 237 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 MOGAT3Q86VF5 341 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 LRRC28Q86X40 367 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 GLB1L2Q8IW92 636 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 RNF113BQ8IZP6 322 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 NPEPL1Q8NDH3 523 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 HAVCR1Q96D42 359 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms