RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 HPRT1P00492 218 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 HLA-DQA1P01909 254 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 APCSP02743 223 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 ARG1P05089 322 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SERPINA5P05154 406 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SERPINE2P07093 398 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 GNAO1P09471 354 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 CT62P0C5K7 136 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 OR5H8P0DN80 308 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 MYL9P24844 172 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 HTR1DP28221 377 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SSTR5P35346 364 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 GPX4P36969 197 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 CEACAM3P40198 252 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PMELP40967 661 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 MAGEA1P43355 309 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SYKP43405 635 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 RAB9AP51151 201 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PRRX1P54821 245 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SP4Q02446 784 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SLC25A11Q02978 314 aaKnown RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 PPIDQ08752 370 aaKnown RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 MERTKQ12866 999 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SRSF5Q13243 272 aaKnown RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 MADCAM1Q13477 382 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 ART3Q13508 389 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 TRAM2Q15035 370 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 NCF4Q15080 339 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PON2Q15165 354 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 MAJINQ3KP22 176 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 HSDL1Q3SXM5 330 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PTPN20Q4JDL3 420 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 LINC00483Q53H64 154 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SMUG1Q53HV7 270 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PPM1LQ5SGD2 360 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 TPTE2P1Q5T6R2 138 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 METTL21CQ5VZV1 264 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 NPSR1Q6W5P4 371 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 ZNF836Q6ZNA1 936 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SHISA6Q6ZSJ9 500 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 HMGN2P46Q86SG4 172 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 LUZP2Q86TE4 346 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 WDR86Q86TI4 376 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 GTPBP8Q8N3Z3 284 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 CBR4Q8N4T8 237 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 RNF182Q8N6D2 247 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 SDR9C7Q8NEX9 313 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 ZNF461Q8TAF7 563 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 ACMSDQ8TDX5 336 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 RTN4IP1Q8WWV3 396 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 BTN2A3PQ96KV6 586 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 JSRP1Q96MG2 331 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 GPR21Q99679 349 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 HSD17B10Q99714 261 aaKnown RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 C1orf50Q9BV19 199 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 CALN1Q9BXU9 219 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 RSPO3Q9BXY4 272 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 FRMD8P1Q9BZ68 369 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 ZYG11BQ9C0D3 744 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 EXO5Q9H790 373 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 TMEM185BQ9H7F4 350 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 ZNF160Q9HCG1 818 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 FGF20Q9NP95 211 aaPredicted RBP1.26□□□□□ -2.21
CDC40-204ENST00000431461 MED4Q9NPJ6 270 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PISDQ9UG56 409 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 GGA2Q9UJY4 613 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 PSG8Q9UQ74 426 aa1.26□□□□□ -2.21
CDC40-204ENST00000431461 KIR2DL5BA0A0G2JN68 375 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 KIR2DL5BA0A0G2JPC4 375 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 KBTBD11-OT1A0A1B0GTJ5 212 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 LSM1O15116 133 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 NUPL2O15504 423 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 CACNG3O60359 315 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 EIF1BO60739 113 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 CDH16O75309 829 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 OR2F2O95006 317 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 CTSLP07711 333 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 CD3GP09693 182 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 PABPC4LP0CB38 370 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 GFAPP14136 432 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 ZNF250P15622 560 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 U2AF2P26368 475 aaKnown RBP eCLIP1.25□□□□□ -2.21
CDC40-204ENST00000431461 GTF2E2P29084 291 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 PBLDP30039 288 aaPredicted RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 MAS1LP35410 378 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 OPRK1P41145 380 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 EIF1P41567 113 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 CDKN1BP46527 198 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 CXCL12P48061 93 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 ZNF138P52744 262 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 EIF3EP60228 445 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 PPP1CBP62140 327 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 RPS15P62841 145 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 REG3AQ06141 175 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 TRDNQ13061 729 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 IL18Q14116 193 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 RGNQ15493 299 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 CHRNA6Q15825 494 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 PRAMEF20Q5VT98 475 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 LRRC66Q68CR7 880 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms