RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SLC16A9Q7RTY1 509 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 BBS1Q8NFJ9 593 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 KBTBD8Q8NFY9 601 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 FAM81AQ8TBF8 368 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 IGFBPL1Q8WX77 278 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 LURAP1Q96LR2 239 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 APOL4Q9BPW4 351 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 BCL2L14Q9BZR8 327 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 WDR76Q9H967 626 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 ELOVL3Q9HB03 270 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 CDH20Q9HBT6 801 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 CA10Q9NS85 328 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 TBCCD1Q9NVR7 557 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
GARNL3-204ENST00000429629 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.93□□□□□ -0.34
GARNL3-204ENST00000429629 TMEM14AQ9Y6G1 99 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 ABCA4P78363 2273 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 CCDC182A6NF36 153 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 TVP23AA6NH52 213 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 ATP6V1G2-DDX39BF2Z307 99 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 H3BSA7 217 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 DOK2O60496 412 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 ATP6V1G2O95670 118 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 DANCRP0C864 163 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 GABRB1P18505 474 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 RGS6P49758 472 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 KRTAP10-9P60411 292 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 GALK2Q01415 458 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 DEGS2Q6QHC5 323 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 DTX2Q86UW9 622 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 EGFL6Q8IUX8 553 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 OTOSQ8NHW6 89 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 ST7LQ8TDW4 575 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 SMAP2Q8WU79 429 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-204ENST00000429629 PIGTQ969N2 578 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 MBD6Q96DN6 1003 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 ZMYND19Q96E35 227 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-204ENST00000429629 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 COG8Q96MW5 612 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF582Q96NG8 517 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-204ENST00000429629 PNRC2Q9NPJ4 139 aaKnown RBP12.92□□□□□ -0.34
GARNL3-204ENST00000429629 RRP15Q9Y3B9 282 aaKnown RBP12.92□□□□□ -0.34
GARNL3-204ENST00000429629 ATP23Q9Y6H3 246 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 TACC2O95359 2948 aa12.92□□□□□ -0.34
GARNL3-204ENST00000429629 C5orf49A4QMS7 147 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 ALOX5APP20292 161 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 OTX1P32242 354 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-204ENST00000429629 TTKP33981 857 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 SLC15A1P46059 708 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 HTR5AP47898 357 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
GARNL3-204ENST00000429629 SPOCK1Q08629 439 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 EFNB3Q15768 340 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 RSPO1Q2MKA7 263 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-204ENST00000429629 AGAP6Q5VW22 663 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 CORO6Q6QEF8 472 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 PAMR1Q6UXH9 720 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 CFAP77Q6ZQR2 320 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 COLCA1Q6ZS62 124 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 DPY19L4Q7Z388 723 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 DCXRQ7Z4W1 244 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 ERI1Q8IV48 349 aaKnown RBP12.91□□□□□ -0.34
GARNL3-204ENST00000429629 SETD9Q8NE22 299 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 TMEM171Q8WVE6 324 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 RNF133Q8WVZ7 376 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 NRG4Q8WWG1 115 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 C4orf45Q96LM5 186 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 ATF6BQ99941 703 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 RASSF4Q9H2L5 321 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 ST6GALNAC2Q9UJ37 374 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 ITPR2Q14571 2701 aa12.91□□□□□ -0.34
GARNL3-204ENST00000429629 SETXQ7Z333 2677 aaKnown RBP12.9□□□□□ -0.34
GARNL3-204ENST00000429629 APOC1P02654 83 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 RAF1P04049 648 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 SPARCP09486 303 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 BMP4P12644 408 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 PAX1P15863 534 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 DCTDP32321 178 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 SERPINF1P36955 418 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 CAPGP40121 348 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 FABP6P51161 128 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 DBPQ10586 325 aaPredicted RBP12.9□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF691Q5VV52 312 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 LYPD4Q6UWN0 246 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 B3GLCTQ6Y288 498 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 ENTHD1Q8IYW4 607 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 PAQR4Q8N4S7 273 aaPredicted RBP12.9□□□□□ -0.34
GARNL3-204ENST00000429629 OR6N2Q8NGY6 317 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 UBE2FQ969M7 185 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 SPTSSAQ969W0 71 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 CNN2Q99439 309 aaKnown RBP12.9□□□□□ -0.34
GARNL3-204ENST00000429629 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 ADI1Q9BV57 179 aa12.9□□□□□ -0.34
GARNL3-204ENST00000429629 NIPAL2Q9H841 368 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms