RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 LRP3O75074 770 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 VSIG10L2P0DP72 767 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 P2RX1P51575 399 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 LIM2P55344 173 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 TAS2R19P59542 299 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 TMEM184AQ6ZMB5 413 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 C1orf87Q8N0U7 546 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 RPP25Q9BUL9 199 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 LUZP4Q9P127 313 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 NDOR1Q9UHB4 597 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
SYNGAP1-203ENST00000428982 PLPP1O14494 284 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 LIMS1P48059 325 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 LSSP48449 732 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 FXYD6P3P58550 94 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 H3F3AP84243 136 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 CDK3Q00526 305 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 ACSM1Q08AH1 577 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 TMEM215Q68D42 235 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 DHRS11Q6UWP2 260 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 PRR18Q8N4B5 295 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR5AR1Q8NGP9 310 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 RGP1Q92546 391 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 DVL3Q92997 716 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 RERGQ96A58 199 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 LGR4Q9BXB1 951 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 GPR87Q9BY21 358 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR11A1Q9GZK7 315 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 TUBA4BQ9H853 241 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 MYOTQ9UBF9 498 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 DOCK4Q8N1I0 1966 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 PSMB6P28072 239 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 ZNF813Q6ZN06 617 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 C19orf47Q8N9M1 422 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC6A18Q96N87 628 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 CNIH4Q9P003 139 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLCO1B1Q9Y6L6 691 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 V9GY05 133 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 A8MWP6 167 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 CDRT15L2A8MXV6 281 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 B3GALT2O43825 422 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 AIFM1O95831 613 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 SRFP11831 508 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 RAB28P51157 221 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 VWA2Q5GFL6 755 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 COX18Q8N8Q8 333 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 MRI1Q9BV20 369 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 FAM117AQ9C073 453 aa13.1□□□□□ -0.31
SYNGAP1-203ENST00000428982 BORCS7-ASMTA0A0B4J1R7 106 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 TEX13DA0A0J9YY54 714 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 PEX12O00623 359 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 HMGN2P05204 90 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 GALNSP34059 522 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 DOC2BQ14184 412 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 NRMQ8IXM6 262 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC24A4Q8NFF2 622 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR5AP2Q8NGF4 316 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 SNX22Q96L94 193 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 ASB17Q8WXJ9 295 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 PIK3IP1Q96FE7 263 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 TAAR9Q96RI9 348 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC23A2Q9UGH3 650 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 HIF3AQ9Y2N7 669 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 MYLKQ15746 1914 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 ITGB1BP1O14713 200 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 CYB5R3P00387 301 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 DBIP07108 87 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 CDK5Q00535 292 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 LRRC69Q6ZNQ3 347 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 CST11Q9H112 138 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 BARX1Q9HBU1 254 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 CTSLP07711 333 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 CDK2P24941 298 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 LILRA3Q8N6C8 439 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 ARIH2OSQ8N7S6 290 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR5K2Q8NHB8 316 aa13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-203ENST00000428982 ARID1AO14497 2285 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms