RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PNRC2Q9NPJ4 139 aaKnown RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 OR6C65A6NJZ3 312 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF670-ZNF695F2Z2N8 137 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 MYL12BO14950 172 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 FARS2O95363 451 aaKnown RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 MMP7P09237 267 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 OR2T7P0C7T2 308 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 PIPP12273 146 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 PCMT1P22061 227 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 CHRNB4P30926 498 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF584Q8IVC4 421 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 PAQR4Q8N4S7 273 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 YIPF7Q8N8F6 280 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 OR2T27Q8NH04 317 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 IPCEF1Q8WWN9 437 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 LRP12Q9Y561 859 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 CELSR2Q9HCU4 2923 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 PNPP00491 289 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 NR4A1P22736 598 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 PSMB9P28065 219 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-202ENST00000424478 TAB1Q15750 504 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 KRT77Q7Z794 578 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 LINC01560Q8TB33 94 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 OR2H1Q9GZK4 316 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 CCNB1IP1Q9NPC3 277 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 CSMD2Q7Z408 3487 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 TRIM64A6NGJ6 449 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 HRGP04196 525 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 NPR2P20594 1047 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 MAGEB1P43366 347 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF83P51522 516 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 GABARAPL2P60520 117 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 SRSF1Q07955 248 aaKnown RBP eCLIP11.71□□□□□ -0.53
PRPF39-202ENST00000424478 GALEQ14376 348 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 RSPO1Q2MKA7 263 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-202ENST00000424478 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 ABHD12BQ7Z5M8 362 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-202ENST00000424478 ITLN2Q8WWU7 325 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-202ENST00000424478 YIPF3Q9GZM5 350 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 ERGIC3Q9Y282 383 aa11.71□□□□□ -0.53
PRPF39-202ENST00000424478 A0A1B0GUH1 482 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 SGCEO43556 437 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 UGT2B10P36537 528 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 HTR5AP47898 357 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 UBE2NP61088 152 aaKnown RBP11.71□□□□□ -0.54
PRPF39-202ENST00000424478 CSNK2BP67870 215 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 TGFBR3Q03167 851 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 POU4F2Q12837 409 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 AQP6Q13520 282 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 INSL4Q14641 139 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 IRF3Q14653 427 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 LIPNQ5VXI9 398 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 VASH1Q7L8A9 365 aaPredicted RBP11.71□□□□□ -0.54
PRPF39-202ENST00000424478 RDH10Q8IZV5 341 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 PELI1Q96FA3 418 aa11.71□□□□□ -0.54
PRPF39-202ENST00000424478 DOPEY2Q9Y3R5 2298 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 NANOS3P60323 173 aaKnown RBP11.7□□□□□ -0.54
PRPF39-202ENST00000424478 LSM6P62312 80 aaKnown RBP11.7□□□□□ -0.54
PRPF39-202ENST00000424478 KCNMB1Q16558 191 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 PCK2Q16822 640 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 CHCHD3Q9NX63 227 aaKnown RBP11.7□□□□□ -0.54
PRPF39-202ENST00000424478 NPAP1Q9NZP6 1156 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 JKAMPQ9P055 326 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 SLC22A13Q9Y226 551 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 LOC100509620A0A075B734 347 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 C19orf84I3L1E1 186 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 CST2P09228 141 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 H2BFMP0C1H6 154 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 TAF13Q15543 124 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 GSG1Q2KHT4 349 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 WFDC8Q8IUA0 241 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 LILRB4Q8NHJ6 448 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 TMEM203Q969S6 136 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 RNF166Q96A37 237 aaPredicted RBP11.7□□□□□ -0.54
PRPF39-202ENST00000424478 SOX7Q9BT81 388 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 CDCA4Q9BXL8 241 aa11.7□□□□□ -0.54
PRPF39-202ENST00000424478 LSM2Q9Y333 95 aaKnown RBP11.7□□□□□ -0.54
PRPF39-202ENST00000424478 TMCC2O75069 709 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 CLPTM1O96005 669 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 TFAP2AP05549 437 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 SLC6A9P48067 706 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 BLVRAP53004 296 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 P2RY6Q15077 328 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 KLHL36Q8N4N3 616 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 OR8B4Q96RC9 309 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
PRPF39-202ENST00000424478 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
PRPF39-202ENST00000424478 HCFC1P51610 2035 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 A0A087WXM4 84 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 C5orf49A4QMS7 147 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 OR5H1A6NKK0 313 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 HOXC12P31275 282 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 GP2P55259 537 aaKnown RBP11.69□□□□□ -0.54
PRPF39-202ENST00000424478 SPOCK1Q08629 439 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms