RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CCSO14618 274 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF43P17038 809 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 LAP3P28838 519 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 PITPNAQ00169 270 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 PDCD1Q15116 288 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ROBO4Q8WZ75 1007 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 HGDQ93099 445 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 NICN1Q9BSH3 213 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 SLC39A1Q9NY26 324 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 COL12A1Q99715 3063 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 A0A1W2PQ72 361 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 OR5H15A6NDH6 313 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 TMEM212A6NML5 194 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF780AO75290 641 aaPredicted RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 TXNDC12O95881 172 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 RFPL3SP0C7P2 107 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 PI3P19957 117 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 TCN2P20062 427 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 RAB11BQ15907 218 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 BEX5Q5H9J7 111 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 RABEPKQ7Z6M1 372 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 UEVLDQ8IX04 471 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 MEIOBQ8N635 442 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 OR6N1Q8NGY5 312 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ADAMTS14Q8WXS8 1223 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 DDIT4LQ96D03 193 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 MRPL48Q96GC5 212 aaKnown RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 HES7Q9BYE0 225 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 IRF2BPLQ9H1B7 796 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 SDHAF3Q9NRP4 125 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 STEAP1Q9UHE8 339 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 HS3ST3B1Q9Y662 390 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 A0A1B0GVI7 797 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ANKUB1A6NFN9 424 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 TO15178 435 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 OR2T1O43869 369 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF254O75437 659 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 GNB3P16520 340 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 PSMB1P20618 241 aaKnown RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 HSD11B1P28845 292 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 CAPZA2P47755 286 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 CHAF1BQ13112 559 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 IL10RAQ13651 578 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 CCDC92Q53HC0 331 aaPredicted RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF101Q8IZC7 436 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 MAML2Q8IZL2 1156 aaPredicted RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 GALNT16Q8N428 558 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 STK35Q8TDR2 534 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 RNF128Q8TEB7 428 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 HAVCR1Q96D42 359 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 SPACA9Q96E40 222 aaPredicted RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 CNTD2Q9H8S5 307 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 MOV10Q9HCE1 1003 aaKnown RBP10.61□□□□□ -0.71
PTPRN-204ENST00000423636 ZFP64Q9NPA5 681 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 TMEM14AQ9Y6G1 99 aa10.61□□□□□ -0.71
PTPRN-204ENST00000423636 CIB4A0PJX0 185 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 D6RAR5 112 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SYT7O43581 403 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SCO1O75880 301 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 RBBP9O75884 186 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 CFDP00746 253 aaPredicted RBP10.6□□□□□ -0.71
PTPRN-204ENST00000423636 ACSM4P0C7M7 580 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 VSIG10L2P0DP72 767 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 GALP22466 123 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 DNASE1P24855 282 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 MNDAP41218 407 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 C4orf46Q504U0 113 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 KCTD18Q6PI47 426 aaPredicted RBP10.6□□□□□ -0.71
PTPRN-204ENST00000423636 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 MIB2Q96AX9 1013 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 RBP7Q96R05 134 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SNX18Q96RF0 628 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 DUSP23Q9BVJ7 150 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF230Q9UIE0 474 aaPredicted RBP10.6□□□□□ -0.71
PTPRN-204ENST00000423636 PCNX1Q96RV3 2341 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 TRBV5-5A0A0J9YX44 114 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 ANKRD34BA5PLL1 514 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 FAM25EA8MYX2 175 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 HTR2CP28335 458 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 GALNSP34059 522 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 BLVRAP53004 296 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SFRP5Q5T4F7 317 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SPINK14Q6IE38 97 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 FTMTQ8N4E7 242 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 OR2AE1Q8NHA4 323 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 ST7LQ8TDW4 575 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SCMH1Q96GD3 660 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 SEC22AQ96IW7 307 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 DIDO1Q9BTC0 2240 aaKnown RBP10.6□□□□□ -0.71
PTPRN-204ENST00000423636 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 GGT3PA6NGU5 568 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 MT-ATP6P00846 226 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF385CQ66K41 422 aaPredicted RBP10.6□□□□□ -0.71
PTPRN-204ENST00000423636 NLRC3Q7RTR2 1065 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF283Q8N7M2 679 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 TEX19Q8NA77 164 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 LIPHQ8WWY8 451 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 442.3 ms