RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 BTBD17A6NE02 478 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TRIM49D1C9J1S8 452 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 E9PQ18 207 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 IFNL4K9M1U5 179 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TRAF3IP2O43734 574 aaPredicted RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 SLC25A17O43808 307 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 EIF4E2O60573 245 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 PSMG1O95456 288 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 PDYNP01213 254 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 PPIAL4GP0DN37 164 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 OR12D1P0DN82 309 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 ZNF12P17014 697 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TSPAN8P19075 237 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 EDN2P20800 178 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 ATP6V1E1P36543 226 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 APOBEC1P41238 236 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 SOX2P48431 317 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 C2orf80Q0P641 193 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 HSPB3Q12988 150 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 PDE7AQ13946 482 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 HERPUD1Q15011 391 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 MOGQ16653 247 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 FAM83EQ2M2I3 478 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 SPIN4Q56A73 249 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 CASC10Q5T4H9 136 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 CCNJQ5T5M9 372 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TMEM225Q6GV28 225 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 DHRS7BQ6IAN0 325 aaPredicted RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 METTL2BQ6P1Q9 378 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 KLC3Q6P597 504 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 C11orf88Q6PI97 169 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 CCDC137Q6PK04 289 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 LRRN1Q6UXK5 716 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 BRD3OSQ6XYD6 125 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 CREB3L2Q70SY1 520 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 CCDC36Q8IYA8 594 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 PAQR4Q8N4S7 273 aaPredicted RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 SPICQ8N5J4 248 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 OR52N4Q8NGI2 321 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 KIF18AQ8NI77 898 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 MAGEE2Q8TD90 523 aaPredicted RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 BCL2L2Q92843 193 aaPredicted RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TMEM45BQ96B21 275 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 MS4A4EQ96PG1 132 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TBX15Q96SF7 602 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 ATOH8Q96SQ7 321 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 B9D2Q9BPU9 175 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 THUMPD3Q9BV44 507 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 LAT2Q9GZY6 243 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 HINT3Q9NQE9 182 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 FARSBQ9NSD9 589 aaKnown RBP4.03□□□□□ -1.76
SFXN1-202ENST00000421887 GIN1Q9NXP7 522 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 SLCO1C1Q9NYB5 712 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TAAR3PQ9P1P4 343 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 CHRNA9Q9UGM1 479 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 IL20RAQ9UHF4 553 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 FZR1Q9UM11 496 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TRAPPC4Q9Y296 219 aa4.03□□□□□ -1.76
SFXN1-202ENST00000421887 TANC2Q9HCD6 1990 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 LCE6AA0A183 80 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 CXorf65A6NEN9 183 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 ANKRD61A6NGH8 418 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 NPIPB11E5RHQ5 1161 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 TRAPPC2LH3BP13 241 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 K7EIL1 84 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 OR7A17O14581 309 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 GPR137BO60478 399 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 MITFO75030 526 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 WISP3O95389 354 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 OTCP00480 354 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 KRT6AP02538 564 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 KRT6BP04259 564 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 MELTFP08582 738 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 ANXA4P09525 319 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 SBK2P0C263 348 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 CD79AP11912 226 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 BCKDHAP12694 445 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF182P17025 639 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 CCNA2P20248 432 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 IVDP26440 423 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 HOXD3P31249 432 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 ASMTP46597 345 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 KRT6CP48668 564 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 CLK1P49759 484 aaKnown RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 KLF3P57682 345 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 GNB2P62879 340 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 EMX1Q04741 257 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF763Q0D2J5 394 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 SLC17A1Q14916 467 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 DUSP5Q16690 384 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 GSG1Q2KHT4 349 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 NDUFAF6Q330K2 333 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 GGTA1PQ4G0N0 100 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 KLHL26Q53HC5 615 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 PRAMEF8Q5VWM4 474 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 PRAMEF7Q5VXH5 474 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 WBP2NLQ6ICG8 309 aa4.02□□□□□ -1.77
SFXN1-202ENST00000421887 NIPAL3Q6P499 406 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms