RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PAQR5Q9NXK6 330 aaPredicted RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 ATRXP46100 2492 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 DOCK7Q96N67 2140 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 SMG1Q96Q15 3661 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 IGLV3-32A0A0A0MS00 114 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 A0A0J9YW62 118 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 A6NIZ1 184 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 E9PLN8 166 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 TRAPPC6AO75865 159 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 TCRBP04435 133 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 CD59P13987 128 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 NTF4P34130 210 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ART1P52961 327 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 RAP1BP61224 184 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 RAP1AP62834 184 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 MRPS15P82914 257 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 TRA2AQ13595 282 aaKnown RBP eCLIP7.81□□□□□ -1.16
SNCA-206ENST00000420646 SGCAQ16586 387 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 Q5BKY6 102 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 TMPPEQ6ZT21 453 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 JAGN1Q8N5M9 183 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ESX1Q8N693 406 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 OR10H5Q8NGA6 315 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 OR4D10Q8NGI6 311 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ASB17Q8WXJ9 295 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ADAMTS14Q8WXS8 1223 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 FGGYQ96C11 551 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 S100A16Q96FQ6 103 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 DEPPQ9NTK1 212 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 P4HTMQ9NXG6 502 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 CYB5R1Q9UHQ9 305 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 PINLYPA6NC86 204 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ETV2O00321 342 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 SRSF10O75494 262 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 LIFP15018 202 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 CXCL3P19876 107 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 PTBP1P26599 531 aaKnown RBP eCLIP7.81□□□□□ -1.16
SNCA-206ENST00000420646 MAPK3P27361 379 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 SELENOPP49908 381 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 MLF1P58340 268 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 SNRPD2P62316 118 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 MFSD13AQ14CX5 517 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 EXT1Q16394 746 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 SLC25A53Q5H9E4 307 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 C5orf46Q6UWT4 87 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 BPHLQ86WA6 291 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 DTX1Q86Y01 620 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 SMIM4Q8WVI0 70 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 DVL3Q92997 716 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 FAM46BQ96A09 425 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ZC3HAV1LQ96H79 300 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 SRXN1Q9BYN0 137 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 DKKL1Q9UK85 242 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 NCKAP5O14513 1909 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ACSM4P0C7M7 580 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 CSRP1P21291 193 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 LAP3P28838 519 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 GNALP38405 381 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 PLA2G5P39877 138 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 TAS2R20P59543 309 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 MRPL28Q13084 256 aaKnown RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 KLF9Q13886 244 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 FCN2Q15485 313 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 FAM205BPQ63HN1 556 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 TIGD3Q6B0B8 471 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 C6orf15Q6UXA7 325 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 LUZP2Q86TE4 346 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ZNF227Q86WZ6 799 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 COMMD2Q86X83 199 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 BEST3Q8N1M1 668 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 OR51E1Q8TCB6 317 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 PAQR8Q8TEZ7 354 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 MIB2Q96AX9 1013 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 ADAT3Q96EY9 351 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 OR10A4Q9H209 315 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 GDF2Q9UK05 429 aaPredicted RBP7.81□□□□□ -1.16
SNCA-206ENST00000420646 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 R4GMQ9 66 aa7.81□□□□□ -1.16
SNCA-206ENST00000420646 TRAV18A0A075B6X5 111 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ZNF726A6NNF4 738 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 CENPXA8MT69 81 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 PHYHO14832 338 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 IGHG1P01857 330 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 TTRP02766 147 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ABOP16442 354 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 WIPI1Q5MNZ9 446 aaPredicted RBP7.8□□□□□ -1.16
SNCA-206ENST00000420646 NOXO1Q8NFA2 376 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 OR8S1Q8NH09 359 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 M1APQ8TC57 530 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 RNF133Q8WVZ7 376 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ROBO4Q8WZ75 1007 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 PHF21AQ96BD5 680 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 FAM3DQ96BQ1 224 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 HAVCR1Q96D42 359 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 MNTQ99583 582 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ANGPTL4Q9BY76 406 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 PLA2G3Q9NZ20 509 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 STEAP1Q9UHE8 339 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 FARSAQ9Y285 508 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms