RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NAV3Q8IVL0 2385 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 IGHV2OR16-5A0A0B4J2B6 119 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 A0A1W2PRQ8 180 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 CDC42EP2O14613 210 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TRMUO75648 421 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 INMTO95050 263 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 UBL3O95164 117 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 RAB36O95755 333 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 IGHMP01871 453 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SEMG1P04279 462 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 H1F0P07305 194 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 QDPRP09417 244 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 OR8G3PP0DMU2 310 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 CD79AP11912 226 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ACADSP16219 412 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF14P17017 642 aaPredicted RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ACVR1BP36896 505 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SLC9A3P48764 834 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 MNAT1P51948 309 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF133P52736 654 aaPredicted RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 MYBPC1Q00872 1141 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 FMODQ06828 376 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 DGCR6Q14129 220 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TAF11Q15544 211 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 CLEC12BQ2HXU8 276 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 IQCCQ4KMZ1 466 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 FGD3Q5JSP0 725 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 C10orf128Q5T292 105 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 PODNL1Q6PEZ8 512 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TMPRSS11FQ6ZWK6 438 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 PIWIL3Q7Z3Z3 882 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 BIVMQ86UB2 503 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 OAFQ86UD1 273 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SKA3Q8IX90 412 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SLC22A24Q8N4F4 322 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 LRRC75AQ8NAA5 344 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SYT14Q8NB59 555 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 NUP37Q8NFH4 326 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 OR51A7Q8NH64 312 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 FGFBP3Q8TAT2 258 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF519Q8TB69 540 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SLC7A13Q8TCU3 470 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 HTRA1Q92743 480 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 HDAC2Q92769 488 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 MCHR2Q969V1 340 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 PYURFQ96I23 114 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF75AQ96N20 296 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TSPAN32Q96QS1 320 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 SMR3AQ99954 134 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 ALG12Q9BV10 488 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TXNIPQ9H3M7 391 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 UNKLQ9H9P5 680 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 STX18Q9P2W9 335 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TMEM5Q9Y2B1 443 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 FAM32AQ9Y421 112 aaKnown RBP5.97□□□□□ -1.45
HMGN1-205ENST00000419378 CSPG4Q6UVK1 2322 aa5.97□□□□□ -1.45
HMGN1-205ENST00000419378 TRGV11A0A075B6L2 103 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 IGKV1D-43A0A0B4J1Z2 117 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 TRBV4-1A0A0J9YWV2 114 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 H7C417 338 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 TRIAP1O43715 76 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 RRP9O43818 475 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ENTPD5O75356 428 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 PDE5AO76074 875 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SPDEFO95238 335 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 FARS2O95363 451 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SLC2A10O95528 541 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 OR4A8P0C604 315 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 PATE4P0C8F1 98 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 NR2C1P13056 603 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF26P17031 533 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ITGA2P17301 1181 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ATP6V1B2P21281 511 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 CALB2P22676 271 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 THBS4P35443 961 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SERPINF1P36955 418 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 OMPP47874 163 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF84P51523 738 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 RIPPLY3P57055 190 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 RPL27P61353 136 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SNRPD2P62316 118 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ERVK-25P63136 954 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 DGCR2P98153 550 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SPIBQ01892 262 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 CHRNB3Q05901 458 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 CD47Q08722 323 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SNTB2Q13425 540 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 TNK1Q13470 666 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SEC23BQ15437 767 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 EFNB3Q15768 340 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ADIPOQQ15848 244 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ANKDD1AQ495B1 522 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SLC36A2Q495M3 483 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SPATS1Q496A3 300 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 FAM205BPQ63HN1 556 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 RGS7BPQ6MZT1 257 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 DNM1P46Q6ZS02 220 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 RINLQ6ZS11 566 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 RRM2BQ7LG56 351 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SLC16A14Q7RTX9 510 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms