RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TMEM269A0A1B0GVZ9 245 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 SHISA3A0PJX4 238 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 OR4C45A6NMZ5 311 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 AHRRA9YTQ3 701 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 LOC110117498-PIK3R3F6TDL0 507 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 CASKO14936 926 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF254O75437 659 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 NCR1O76036 304 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 SLC2A1P11166 492 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 CD53P19397 219 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 NPR2P20594 1047 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 SOX2P48431 317 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 PRKXP51817 358 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 CAV3P56539 151 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 TUBA1BP68363 451 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 ARF1P84077 181 aaKnown RBP10.94□□□□□ -0.66
CHMP3-204ENST00000409727 MRPL28Q13084 256 aaKnown RBP10.94□□□□□ -0.66
CHMP3-204ENST00000409727 TRAM1Q15629 374 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 FAM27BQ5VT28 67 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 TUBA1AQ71U36 451 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 CD163Q86VB7 1156 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 SLC22A24Q8N4F4 322 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 TEX19Q8NA77 164 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 GJC3Q8NFK1 279 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 OR10AC1Q8NH08 325 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 ORAI1Q96D31 301 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 SLIRPQ9GZT3 109 aaKnown RBP10.94□□□□□ -0.66
CHMP3-204ENST00000409727 COMMD4Q9H0A8 199 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 PNRC2Q9NPJ4 139 aaKnown RBP10.94□□□□□ -0.66
CHMP3-204ENST00000409727 R4GMQ9 66 aa10.94□□□□□ -0.66
CHMP3-204ENST00000409727 PRRC2CQ9Y520 2896 aaKnown RBP10.94□□□□□ -0.66
CHMP3-204ENST00000409727 ACOD1A6NK06 481 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 HSPB2A8KAH6 182 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SS18L1O75177 396 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 CLPXO76031 633 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SERPINA3P01011 423 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 HNRNPA0Q13151 305 aaKnown RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 HSPB2Q16082 182 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 ZMAT1Q5H9K5 638 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SLC16A14Q7RTX9 510 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SKA3Q8IX90 412 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 MCFD2Q8NI22 146 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 RPS4Y2Q8TD47 263 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 HAVCR2Q8TDQ0 301 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SLC7A6Q92536 515 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 COQ7Q99807 217 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 KCNS3Q9BQ31 491 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 C6orf62Q9GZU0 229 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 PLEK2Q9NYT0 353 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 PIEZO2Q9H5I5 2752 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 FREM1Q5H8C1 2179 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 OR6C65A6NJZ3 312 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 TMEM212A6NML5 194 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 F5H5K5 113 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 GPRIN2O60269 458 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 OCM2P0CE71 109 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SOX6P35712 828 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 PER3P56645 1201 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 FOXF2Q12947 444 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF829Q3KNS6 432 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 CCDC92Q53HC0 331 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 KRTCAP3Q53RY4 240 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 YIF1BQ5BJH7 314 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF324BQ6AW86 544 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 DEGS2Q6QHC5 323 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 CATSPERDQ86XM0 798 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 EGFL6Q8IUX8 553 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 RPRMLQ8N4K4 120 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 IL17RDQ8NFM7 739 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 FGFBP3Q8TAT2 258 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 TBC1D15Q8TC07 691 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 WNT2BQ93097 391 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 SNRNP40Q96DI7 357 aaKnown RBP10.93□□□□□ -0.66
CHMP3-204ENST00000409727 ATF6BQ99941 703 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 BARHL1Q9BZE3 327 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 OR52A1Q9UKL2 312 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
CHMP3-204ENST00000409727 CHD8Q9HCK8 2581 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 SC5DO75845 299 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 FARS2O95363 451 aaKnown RBP10.92□□□□□ -0.66
CHMP3-204ENST00000409727 CD1AP06126 327 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 CST2P09228 141 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF32P17041 273 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 GALP22466 123 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 SLC6A9P48067 706 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 CX3CR1P49238 355 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-204ENST00000409727 BCL2L15Q5TBC7 163 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 NSUN5P2Q63ZY6 315 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF774Q6NX45 483 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF544Q6NX49 715 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 FDX2Q6P4F2 183 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 FAM214BQ7L5A3 538 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF283Q8N7M2 679 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 AKR7LQ8NHP1 331 aa10.92□□□□□ -0.66
CHMP3-204ENST00000409727 TSEN15Q8WW01 171 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms