RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.37□□□□□ -0.43
GPNMB-203ENST00000409458 SARAFQ96BY9 339 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 ORAI1Q96D31 301 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 DERL3Q96Q80 235 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 FOXB1Q99853 325 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 NOX4Q9NPH5 578 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 G6PC2Q9NQR9 355 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 SLC7A10Q9NS82 523 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 PARPBPQ9NWS1 579 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 FAM206AQ9NX38 181 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 OR52A1Q9UKL2 312 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 ARHGAP21Q5T5U3 1957 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 NCOA6Q14686 2063 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-203ENST00000409458 A0A075B6Q4 140 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 TMEM269A0A1B0GVZ9 245 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 KRT33AO76009 404 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 AGTR1P30556 359 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 OR10A3P58181 314 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 INAQ16352 499 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF829Q3KNS6 432 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-203ENST00000409458 Q499Y3 187 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 FAM27BQ5VT28 67 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 KLHL24Q6TFL4 600 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 P4HA3Q7Z4N8 544 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 MFSD4AQ8N468 514 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 OR5M9Q8NGP3 310 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 APH1AQ96BI3 265 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 TRIB1Q96RU8 372 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 SH3GL3Q99963 347 aa12.36□□□□□ -0.43
GPNMB-203ENST00000409458 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
GPNMB-203ENST00000409458 IQCMA0A1B0GVH7 501 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 DOK2O60496 412 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 ARL6IP5O75915 188 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 CST2P09228 141 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 OCM2P0CE71 109 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 HSD11B1P28845 292 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 DCTDP32321 178 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 SOX2P48431 317 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 MMP16P51512 607 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 UCNP55089 124 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 PSMA6P60900 246 aaKnown RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 HSD17B12Q53GQ0 312 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 CCDC92Q53HC0 331 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF544Q6NX49 715 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 FGD2Q7Z6J4 655 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 SLC22A24Q8N4F4 322 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 BRD7Q9NPI1 651 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 DDX28Q9NUL7 540 aaKnown RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 ANKRD11Q6UB99 2663 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 TRAV1-2A0A0B4J238 106 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 A0A0G2JK05 382 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 RPL36A-HNRNPH2H7BZ11 118 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 CTDSP2O14595 271 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 CXADRP78310 365 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 TAF13Q15543 124 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 BCL2L15Q5TBC7 163 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 RHOUQ7L0Q8 258 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 SYT9Q86SS6 491 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 GJC3Q8NFK1 279 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 PHYHIPQ92561 330 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 GMPPAQ96IJ6 420 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 GP6Q9HCN6 339 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 CRNNQ9UBG3 495 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-203ENST00000409458 PRSS50Q9UI38 385 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 SLC5A6Q9Y289 635 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 PEX16Q9Y5Y5 336 aa12.35□□□□□ -0.43
GPNMB-203ENST00000409458 BOD1L1Q8NFC6 3051 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 TRBV5-7A0A0A0MS05 114 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 CLDN25C9JDP6 229 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 J3QRK9 145 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 SS18L1O75177 396 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-203ENST00000409458 CRYABP02511 175 aaKnown RBP12.34□□□□□ -0.43
GPNMB-203ENST00000409458 ANOS1P23352 680 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 MAPK3P27361 379 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-203ENST00000409458 CX3CR1P49238 355 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 PRKXP51817 358 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 GRB2P62993 217 aaKnown RBP12.34□□□□□ -0.43
GPNMB-203ENST00000409458 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 BTLAQ7Z6A9 289 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 TPRA1Q86W33 373 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF100Q8IYN0 542 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 TSEN15Q8WW01 171 aaKnown RBP12.34□□□□□ -0.43
GPNMB-203ENST00000409458 S100ZQ8WXG8 99 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 GPR137Q96N19 417 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 ATF6BQ99941 703 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 PBOV1Q9GZY1 135 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF71Q9NQZ8 489 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-203ENST00000409458 MED12LQ86YW9 2145 aa12.34□□□□□ -0.43
GPNMB-203ENST00000409458 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms