RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GALNT8Q9NY28 637 aa17.9■□□□□ 0.46
CHKB-201ENST00000406938 SLC5A6Q9Y289 635 aa17.9■□□□□ 0.46
CHKB-201ENST00000406938 LRP12Q9Y561 859 aa17.9■□□□□ 0.46
CHKB-201ENST00000406938 RELNP78509 3460 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 LALBAP00709 142 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 TUBA1BP68363 451 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 TIGD6Q17RP2 521 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 CCDC92Q53HC0 331 aaPredicted RBP17.89■□□□□ 0.45
CHKB-201ENST00000406938 SYT6Q5T7P8 510 aaPredicted RBP17.89■□□□□ 0.45
CHKB-201ENST00000406938 STAC2Q6ZMT1 411 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 TUBA1AQ71U36 451 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 BHLHA15Q7RTS1 189 aaPredicted RBP17.89■□□□□ 0.45
CHKB-201ENST00000406938 COG8Q96MW5 612 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 MGLLQ99685 303 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 WACQ9BTA9 647 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 OR2H1Q9GZK4 316 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 ELOVL3Q9HB03 270 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 PLEK2Q9NYT0 353 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 TIMM10BQ9Y5J6 103 aa17.89■□□□□ 0.45
CHKB-201ENST00000406938 SGCEO43556 437 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 DOK2O60496 412 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 H2BFMP0C1H6 154 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 CD79AP11912 226 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 CHRNB4P30926 498 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 PSG4Q00888 419 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 RAB39AQ14964 217 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 RAB35Q15286 201 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 KCTD20Q7Z5Y7 419 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 NANOS1Q8WY41 292 aaKnown RBP17.88■□□□□ 0.45
CHKB-201ENST00000406938 BOD1Q96IK1 185 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 OPALINQ96PE5 141 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 WNT5BQ9H1J7 359 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 RNF121Q9H920 327 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 NOX3Q9HBY0 568 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 TRIM36Q9NQ86 728 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 DDX28Q9NUL7 540 aaKnown RBP17.88■□□□□ 0.45
CHKB-201ENST00000406938 BABAM2Q9NXR7 383 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 COQ3Q9NZJ6 369 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 GRIP1Q9Y3R0 1128 aa17.88■□□□□ 0.45
CHKB-201ENST00000406938 E9PI62 339 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 UBL3O95164 117 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 TACSTD2P09758 323 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 HOXC12P31275 282 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 GTF2A1P52655 376 aaPredicted RBP17.87■□□□□ 0.45
CHKB-201ENST00000406938 C4orf17Q53FE4 359 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 ELFN2Q5R3F8 820 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 LIPNQ5VXI9 398 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 ZNF774Q6NX45 483 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 DEGS2Q6QHC5 323 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 RHOUQ7L0Q8 258 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 C17orf78Q8N4C9 275 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 AKR7LQ8NHP1 331 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 TMIGD2Q96BF3 282 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 ATF6BQ99941 703 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 HDHD2Q9H0R4 259 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 FBXL3Q9UKT7 428 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 A0A1W2PR80 420 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 ZNF254O75437 659 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 RPP14O95059 124 aaKnown RBP17.87■□□□□ 0.45
CHKB-201ENST00000406938 PSMB1P20618 241 aaKnown RBP17.87■□□□□ 0.45
CHKB-201ENST00000406938 IL32P24001 234 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 PSMB10P40306 273 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 RIDAP52758 137 aaKnown RBP17.87■□□□□ 0.45
CHKB-201ENST00000406938 UBE2NP61088 152 aaKnown RBP17.87■□□□□ 0.45
CHKB-201ENST00000406938 ACSM1Q08AH1 577 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 MLLT11Q13015 90 aaPredicted RBP17.87■□□□□ 0.45
CHKB-201ENST00000406938 ARMCX4Q5H9R4 360 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 PABPC1L2AQ5JQF8 200 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 DPPA2Q7Z7J5 298 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 SATL1Q86VE3 508 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 ZFP41Q8N8Y5 198 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 BATF3Q9NR55 127 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 SLC17A5Q9NRA2 495 aa17.87■□□□□ 0.45
CHKB-201ENST00000406938 SYNGR3O43761 229 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 GBX2P52951 348 aaPredicted RBP17.86■□□□□ 0.45
CHKB-201ENST00000406938 BDH1Q02338 343 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 FAM27E3Q08E93 113 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 TAF13Q15543 124 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 GSG1Q2KHT4 349 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 MTFR2Q6P444 385 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.86■□□□□ 0.45
CHKB-201ENST00000406938 EGFL6Q8IUX8 553 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 CCDC36Q8IYA8 594 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 OR13F1Q8NGS4 319 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 HSD17B8Q92506 261 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 RNF166Q96A37 237 aaPredicted RBP17.86■□□□□ 0.45
CHKB-201ENST00000406938 ISYNA1Q9NPH2 558 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 B3GNT2Q9NY97 397 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 ELOVL5Q9NYP7 299 aa17.86■□□□□ 0.45
CHKB-201ENST00000406938 NCOA6Q14686 2063 aaPredicted RBP17.86■□□□□ 0.45
CHKB-201ENST00000406938 ARPC4-TTLL3A0A0A6YYG9 625 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 PNMA8CA0A1B0GUJ8 204 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 HOXB1P14653 301 aaPredicted RBP17.85■□□□□ 0.45
CHKB-201ENST00000406938 HSD11B1P28845 292 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 CCKARP32238 428 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 ARR3P36575 388 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 LIPAP38571 399 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 RAB1AP62820 205 aa17.85■□□□□ 0.45
CHKB-201ENST00000406938 GRB2P62993 217 aaKnown RBP17.85■□□□□ 0.45
CHKB-201ENST00000406938 TSTQ16762 297 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms