RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TEX30Q5JUR7 227 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FAM27D1Q5T7N8 215 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 VWA1Q6PCB0 445 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 USP43Q70EL4 1123 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FAM214BQ7L5A3 538 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 CEACAM19Q7Z692 300 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ADGRE4PQ86SQ3 457 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 OR10S1Q8NGN2 331 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 OR2G2Q8NGZ5 317 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 OR5AK2Q8NH90 309 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 RNF133Q8WVZ7 376 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC7A6Q92536 515 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 WNT2BQ93097 391 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FBXO17Q96EF6 278 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 KCTD7Q96MP8 289 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SNTG1Q9NSN8 517 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 PTTG2Q9NZH5 202 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FRRS1LQ9P0K9 344 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC22A13Q9Y226 551 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 GSTK1Q9Y2Q3 226 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SF3B6Q9Y3B4 125 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 IGSF10Q6WRI0 2623 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 OR6C65A6NJZ3 312 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ZNF878C9JN71 531 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 LOC110117498-PIK3R3F6TDL0 507 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 PRRG2O14669 202 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 RGS9O75916 674 aaPredicted RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 CDRT1O95170 752 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 PNPP00491 289 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 CALRP27797 417 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 SDC2P34741 201 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 OPRL1P41146 370 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SOX2P48431 317 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ZNF133P52736 654 aaPredicted RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 LSM6P62312 80 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 ROM1Q03395 351 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 GPR50Q13585 617 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 GFOD2Q3B7J2 385 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ACSM3Q53FZ2 586 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 WDR38Q5JTN6 314 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FBXW9Q5XUX1 488 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 NSUN5P2Q63ZY6 315 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ZNF774Q6NX45 483 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 LUZP2Q86TE4 346 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SKA3Q8IX90 412 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 PRSS35Q8N3Z0 413 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 GJC3Q8NFK1 279 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 KBTBD8Q8NFY9 601 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 AKR7LQ8NHP1 331 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ABHD4Q8TB40 342 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ORAI1Q96D31 301 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 OR14A2Q96R54 314 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 COMMD4Q9H0A8 199 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 KCNN2Q9H2S1 579 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 RNF121Q9H920 327 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 TUBD1Q9UJT1 453 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 TINAGQ9UJW2 476 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 TRDV1A0A1B0GX56 115 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ACOD1A6NK06 481 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CASKO14936 926 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OGG1O15527 345 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SGCEO43556 437 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SLC19A2O60779 497 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SS18L1O75177 396 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 IL2RAP01589 272 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 HLA-HP01893 362 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ANXA2P07355 339 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 DBHP09172 617 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OCM2P0CE71 109 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CD79AP11912 226 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 GABRA1P14867 456 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF32P17041 273 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CCNOP22674 350 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 PEX19P40855 299 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 KIR2DL2P43627 348 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 TGM4P49221 684 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CAV3P56539 151 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TUBA1BP68363 451 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 KLRB1Q12918 225 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SF3B4Q15427 424 aaKnown RBP eCLIP3.25□□□□□ -1.899e-8■■■□□ 17.1
RTN4-208ENST00000404909 KCNMB1Q16558 191 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 HIKESHIQ53FT3 197 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF324BQ6AW86 544 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 RTL6Q6ICC9 239 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR2A2Q6IF42 318 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TMEM91Q6ZNR0 172 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TUBA1AQ71U36 451 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 COMMD2Q86X83 199 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MS4A15Q8N5U1 240 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF283Q8N7M2 679 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR51A4Q8NGJ6 313 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR10AC1Q8NH08 325 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 FGFBP3Q8TAT2 258 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 FAM57AQ8TBR7 257 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TSEN15Q8WW01 171 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 ITFG2Q969R8 447 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 RNF166Q96A37 237 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms