RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ZSCAN5BA6NJL1 495 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 TNFRSF11BO00300 401 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 DCTN6O00399 190 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 ARPC3O15145 178 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 RER1O15258 196 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 FAM107AO95990 144 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 TFP02787 698 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 HIST1H1CP16403 213 aaKnown RBP11.32□□□□□ -0.6
SDF4-203ENST00000403997 TUBG1P23258 451 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 GSSP48637 474 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 HMGA2P52926 109 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 TSPAN31Q12999 210 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 PSG7Q13046 419 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 HFEQ30201 348 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
SDF4-203ENST00000403997 MTX3Q5HYI7 312 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 PGBD2Q6P3X8 592 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 OR6V1Q8N148 313 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 CCDC197Q8NCU1 140 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 NPEPL1Q8NDH3 523 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 OR1F12Q8NHA8 337 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 CCL17Q92583 94 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 CMBLQ96DG6 245 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 ELMOD3Q96FG2 381 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 EGLN1Q9GZT9 426 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 POFUT1Q9H488 388 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 LPAR2Q9HBW0 351 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 TUBG2Q9NRH3 451 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 KLHL21Q9UJP4 597 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 B9D1Q9UPM9 204 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 STARD10Q9Y365 291 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 CACNG2Q9Y698 323 aa11.32□□□□□ -0.6
SDF4-203ENST00000403997 FBN1P35555 2871 aaKnown RBP11.32□□□□□ -0.6
SDF4-203ENST00000403997 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 IGLV1-36A0A0B4J1U3 117 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 OR6C6A6NF89 314 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 FAM157AC9JC47 383 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 CLDN25C9JDP6 229 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 PHF1O43189 567 aaPredicted RBP11.31□□□□□ -0.6
SDF4-203ENST00000403997 IDH3BO43837 385 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 DBHP09172 617 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 GAAP10253 952 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 SRP14P37108 136 aaKnown RBP11.31□□□□□ -0.6
SDF4-203ENST00000403997 DVL1P1P54792 670 aaPredicted RBP11.31□□□□□ -0.6
SDF4-203ENST00000403997 LMO4P61968 165 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 MEP1BQ16820 701 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 ZMAT1Q5H9K5 638 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 SLC35F1Q5T1Q4 408 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 PGM2L1Q6PCE3 622 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 RINLQ6ZS11 566 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 GLCCI1Q86VQ1 547 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 DHFR2Q86XF0 187 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 ARHGAP24Q8N264 748 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 GJC3Q8NFK1 279 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 OR52E2Q8NGJ4 325 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 RAB1CQ92928 201 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 TIMD4Q96H15 378 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 COG8Q96MW5 612 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 RPRD1BQ9NQG5 326 aaKnown RBP11.31□□□□□ -0.6
SDF4-203ENST00000403997 CGGBP1Q9UFW8 167 aaPredicted RBP11.31□□□□□ -0.6
SDF4-203ENST00000403997 PURGQ9UJV8 347 aaKnown RBP11.31□□□□□ -0.6
SDF4-203ENST00000403997 LYVE1Q9Y5Y7 322 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 COL6A5A8TX70 2615 aa11.31□□□□□ -0.6
SDF4-203ENST00000403997 CCNB2O95067 398 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 HLA-DQA2P01906 255 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 MSMBP08118 114 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 ADH4P08319 380 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 PCMT1P22061 227 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 CALB2P22676 271 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 THBS2P35442 1172 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 TNFAIP6P98066 277 aaPredicted RBP11.3□□□□□ -0.6
SDF4-203ENST00000403997 DBPQ10586 325 aaPredicted RBP11.3□□□□□ -0.6
SDF4-203ENST00000403997 TRIM25Q14258 630 aaKnown RBP11.3□□□□□ -0.6
SDF4-203ENST00000403997 SLC36A3Q495N2 470 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 CLEC12AQ5QGZ9 265 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 CORO6Q6QEF8 472 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 ZNF620Q6ZNG0 422 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 SDR9C7Q8NEX9 313 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 OR9Q2Q8NGE9 314 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 OR52L1Q8NGH7 329 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 SPATA3Q8NHX4 192 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 PTP4A1Q93096 173 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 HAVCR1Q96D42 359 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 DIRC2Q96SL1 478 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 CDADC1Q9BWV3 514 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 TRIM15Q9C019 465 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 MUC13Q9H3R2 512 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 FN3KQ9H479 309 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 EGLN3Q9H6Z9 239 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 HIF1ANQ9NWT6 349 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
SDF4-203ENST00000403997 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms