RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TMEM38AQ9H6F2 299 aa2.46□□□□□ -2.02
HMGB1P17-201ENST00000403495 PXMP2Q9NR77 195 aa2.46□□□□□ -2.02
HMGB1P17-201ENST00000403495 MYEF2Q9P2K5 600 aaKnown RBP2.46□□□□□ -2.02
HMGB1P17-201ENST00000403495 COL16A1Q07092 1604 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P17-201ENST00000403495 ASTN1O14525 1302 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 AKNAQ7Z591 1439 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 KBTBD11-OT1A0A1B0GTJ5 212 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 LYRM9A8MSI8 78 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 SIVA1O15304 175 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 SPOPO43791 374 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 FCN3O75636 299 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 OTCP00480 354 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 IFNW1P05000 195 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 BCHEP06276 602 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 S100A9P06702 114 aaKnown RBP2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CLTAP09496 248 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 UBCP0CG48 685 aaKnown RBP2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CTRB1P17538 263 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 OMGP23515 440 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CSNK1A1P48729 337 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 SERPINB8P50452 374 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 PON2Q15165 354 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 GABRA6Q16445 453 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 METTL21CQ5VZV1 264 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 PLCXD3Q63HM9 321 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 TTC23LQ6PF05 361 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 FAM92BQ6ZTR7 304 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CBLN2Q8IUK8 224 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CYB561D1Q8N8Q1 229 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 Q8N9L7 120 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR51E1Q8TCB6 317 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CA5BP1Q8WTZ4 195 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 APH1BQ8WW43 257 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 KIAA1143Q96AT1 154 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 RBMXL1Q96E39 390 aaKnown RBP2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 DNAJC1Q96KC8 554 aaKnown RBP2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 ANKRD60Q9BZ19 345 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 BLZF1Q9H2G9 400 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 SPNS1Q9H2V7 528 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CYP3A43Q9HB55 503 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 PEF1Q9UBV8 284 aaKnown RBP2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 CLN8Q9UBY8 286 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZNF222Q9UK12 451 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 KLK12Q9UKR0 248 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 TBX21Q9UL17 535 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 PIKFYVEQ9Y2I7 2098 aa2.45□□□□□ -2.02
HMGB1P17-201ENST00000403495 MAPK8IP3Q9UPT6 1336 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 IGHV3-74A0A0B4J1X5 117 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 IGHV5-51A0A0C4DH38 117 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 IGHV3-66A0A0C4DH42 116 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 A0A1B0GVX0 72 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 H7C417 338 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 GABRPO00591 440 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 NVLO15381 856 aaKnown RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 RAD51CO43502 376 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 SCELO95171 688 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 LSM8O95777 96 aaKnown RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 OXTP01178 125 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 PRKACAP17612 351 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 U2AF2P26368 475 aaKnown RBP eCLIP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 NUP62P37198 522 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 KIR3DL2P43630 455 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 RAP1AP62834 184 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 LRRC63Q05C16 580 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 TCP10Q12799 353 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 ERCC8Q13216 396 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 TRMT5Q32P41 509 aaKnown RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 HIKESHIQ53FT3 197 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 XKR4Q5GH76 650 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 AADACL4Q5VUY2 407 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 C16orf87Q6PH81 154 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 MRPL55Q7Z7F7 128 aaKnown RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 LRRC75AQ8NAA5 344 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 GPR26Q8NDV2 337 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR10G2Q8NGC3 310 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR52E2Q8NGJ4 325 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 LKAAEAR1Q8TD35 194 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 GPX8Q8TED1 209 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 GLYATL2Q8WU03 294 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 NEURL3Q96EH8 262 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 UQCC2Q9BRT2 126 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 IFI27L2Q9H2X8 130 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 C8orf33Q9H7E9 229 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 C12orf10Q9HB07 376 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 MTFP1Q9UDX5 166 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 RCL1Q9Y2P8 373 aaKnown RBP2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 RHBDD3Q9Y3P4 386 aa2.44□□□□□ -2.02
HMGB1P17-201ENST00000403495 NACAE9PAV3 2078 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 IGLV4-69A0A075B6H9 119 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 IGLV3-16A0A075B6K0 115 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 M0R3G1 203 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 BCKDKO14874 412 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 SNAI2O43623 268 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 KRT16P08779 473 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 HOXC4P09017 264 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RHOXF2BP0C7M4 288 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RAB3BP20337 219 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 MAGP20916 626 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 MSR1P21757 451 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 F2RP25116 425 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms