RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLC2A10O95528 541 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 LY6G6DO95868 133 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 F12P00748 615 aaPredicted RBP12.58□□□□□ -0.4
SEC13-208ENST00000397109 CSF3P09919 207 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 DCKP27707 260 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 GSTT1P30711 240 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 TMBIM6P55061 237 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 RPS23P62266 143 aaKnown RBP12.58□□□□□ -0.4
SEC13-208ENST00000397109 MEDAGQ5VYS4 303 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 C12orf73Q69YU5 71 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 XAF1Q6GPH4 301 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 RPL13AP3Q6NVV1 102 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 ZNF620Q6ZNG0 422 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 OR1J2Q8NGS2 313 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 OR13F1Q8NGS4 319 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 FGFBP3Q8TAT2 258 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 TSPAN32Q96QS1 320 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 SIGLEC11Q96RL6 698 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 FKBP14Q9NWM8 211 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 CLN6Q9NWW5 311 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 IL20Q9NYY1 176 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 CNOT2Q9NZN8 540 aaKnown RBP12.58□□□□□ -0.4
SEC13-208ENST00000397109 UGT2A1Q9Y4X1 527 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 HIVEP2P31629 2446 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 IQCMA0A1B0GVH7 501 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 SLC22A23A1A5C7 686 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 CCDC160A6NGH7 325 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 PTGES3LE9PB15 166 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 FAM20BO75063 409 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 TP53P04637 393 aaPredicted RBP12.57□□□□□ -0.4
SEC13-208ENST00000397109 PCMT1P22061 227 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 GLRXP35754 106 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 EVX1P49640 407 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 PPOXP50336 477 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 ERVK-25P63136 954 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 CDK5Q00535 292 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 SGCAQ16586 387 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 GPR139Q6DWJ6 353 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 SMARCD3Q6STE5 483 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 LRRC18Q8N456 261 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 SLC30A7Q8NEW0 376 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 OR10H5Q8NGA6 315 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 APH1BQ8WW43 257 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 NSMAFQ92636 917 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 VRK1Q99986 396 aaPredicted RBP12.57□□□□□ -0.4
SEC13-208ENST00000397109 YIPF3Q9GZM5 350 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 SLC25A19Q9HC21 320 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 CDH10Q9Y6N8 788 aa12.57□□□□□ -0.4
SEC13-208ENST00000397109 NIPBLQ6KC79 2804 aaeCLIP12.57□□□□□ -0.4
SEC13-208ENST00000397109 ABCA1O95477 2261 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 IGKV1D-43A0A0B4J1Z2 117 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 H3BN98 237 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 ERCC1P07992 297 aaPredicted RBP12.56□□□□□ -0.4
SEC13-208ENST00000397109 MMP7P09237 267 aaPredicted RBP12.56□□□□□ -0.4
SEC13-208ENST00000397109 PIPP12273 146 aaPredicted RBP12.56□□□□□ -0.4
SEC13-208ENST00000397109 APEHP13798 732 aaKnown RBP12.56□□□□□ -0.4
SEC13-208ENST00000397109 CDAP32320 146 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 HSF2Q03933 536 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 FMODQ06828 376 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 OCLNQ16625 522 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 TBC1D28Q2M2D7 210 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 FAM27BQ5VT28 67 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 FAM122BQ7Z309 247 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 ERI1Q8IV48 349 aaKnown RBP12.56□□□□□ -0.4
SEC13-208ENST00000397109 ZNF584Q8IVC4 421 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 FANK1Q8TC84 345 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 RORBQ92753 470 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 MUL1Q969V5 352 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 NABP1Q96AH0 204 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 RAB1BQ9H0U4 201 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 OR52D1Q9H346 318 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 CDH20Q9HBT6 801 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 NAV3Q8IVL0 2385 aa12.56□□□□□ -0.4
SEC13-208ENST00000397109 TMEM129A0AVI4 362 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 XPNPEP2O43895 674 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 NOL3O60936 208 aaKnown RBP12.55□□□□□ -0.4
SEC13-208ENST00000397109 HTR1AP08908 422 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 SLC25A16P16260 332 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 SDHAP31040 664 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 FMO3P31513 532 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 APLNRP35414 380 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 PCBD1P61457 104 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 EMX1Q04741 257 aaPredicted RBP12.55□□□□□ -0.4
SEC13-208ENST00000397109 SYT6Q5T7P8 510 aaPredicted RBP12.55□□□□□ -0.4
SEC13-208ENST00000397109 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 DPY19L2P2Q6ZN68 376 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 FAM168AQ92567 244 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 HTRA1Q92743 480 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 MRPL24Q96A35 216 aaKnown RBP12.55□□□□□ -0.4
SEC13-208ENST00000397109 Q96M85 177 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 SORCS2Q96PQ0 1159 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms