RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 KHDRBS3O75525 346 aaKnown RBP13.68□□□□□ -0.22
CPSF7-202ENST00000394888 AHSA1O95433 338 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 ARL4DP49703 201 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 MMP16P51512 607 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 POU3F1Q03052 451 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-202ENST00000394888 GLYATL3Q5SZD4 288 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 OR10K2Q6IF99 312 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 SLC25A25Q6KCM7 469 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 FN3KRPQ9HA64 309 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 SH2D2AQ9NP31 389 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 PILRBQ9UKJ0 227 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 SNRPGP15A8MWD9 76 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 SCRG1O75711 98 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 OR2J2O76002 312 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 HLA-DQA2P01906 255 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 UMODP07911 640 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 CENPAP49450 140 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 UBE2MP61081 183 aaKnown RBP13.68□□□□□ -0.22
CPSF7-202ENST00000394888 PCOLCEQ15113 449 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 MUC20Q8N307 709 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-202ENST00000394888 TSEN15Q8WW01 171 aaKnown RBP13.68□□□□□ -0.22
CPSF7-202ENST00000394888 OR52A1Q9UKL2 312 aa13.68□□□□□ -0.22
CPSF7-202ENST00000394888 CRABP1P29762 137 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 RIDAP52758 137 aaKnown RBP13.67□□□□□ -0.22
CPSF7-202ENST00000394888 RAB11BQ15907 218 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
CPSF7-202ENST00000394888 KRT77Q7Z794 578 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 OR51S1Q8NGJ8 323 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 OR2T35Q8NGX2 323 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 WIF1Q9Y5W5 379 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 A0A0A6YYD4 124 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 TOXO94900 526 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 CD74P04233 296 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 PPM1FP49593 454 aaPredicted RBP13.67□□□□□ -0.22
CPSF7-202ENST00000394888 AQP3Q92482 292 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 IRF2BPLQ9H1B7 796 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 PTGES2Q9H7Z7 377 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 ING4Q9UNL4 249 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
CPSF7-202ENST00000394888 NAGAP17050 411 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 DNASE1P24855 282 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 MAML2Q8IZL2 1156 aaPredicted RBP13.67□□□□□ -0.22
CPSF7-202ENST00000394888 OR1J2Q8NGS2 313 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 OR13C8Q8NGS7 320 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 RASL10BQ96S79 203 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 ALKBH4Q9NXW9 302 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 DHDHQ9UQ10 334 aa13.67□□□□□ -0.22
CPSF7-202ENST00000394888 TRAV18A0A075B6X5 111 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 LOC102723996A0A087X1L8 192 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 OR14I1A6ND48 311 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 HTR2CP28335 458 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 CLPPQ16740 277 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 SLC22A6Q4U2R8 563 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 OPN4Q9UHM6 478 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 H3BML4 177 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 RAB27BO00194 218 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 HEXBP07686 556 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 CD63P08962 238 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 B3GNTL1Q67FW5 361 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 ADPRHL1Q8NDY3 354 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 SLC25A44Q96H78 314 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 TMPRSS13Q9BYE2 586 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 PISDQ9UG56 409 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 TMEM265A0A087WTH1 108 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 P2RY10O00398 339 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 IGLV3-1P01715 115 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 GIPP09681 153 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 POU3F2P20265 443 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 ACHEP22303 614 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 BIDP55957 195 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 AP3S2P59780 193 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 PHYHD1Q5SRE7 291 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 SLC25A47Q6Q0C1 308 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 DEGS2Q6QHC5 323 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 OR2I1PQ8NGU4 316 aa13.66□□□□□ -0.22
CPSF7-202ENST00000394888 PCNPQ8WW12 178 aaKnown RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 AKAP7Q9P0M2 348 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-202ENST00000394888 TNFRSF10AO00220 468 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 SSNA1O43805 119 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 KLF7O75840 302 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 OPN1LWP04000 364 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 CLDN6P56747 220 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 DCDP81605 110 aaKnown RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 H3F3AP84243 136 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 SPOCK1Q08629 439 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 RSPO1Q2MKA7 263 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 ZNF260Q3ZCT1 412 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 NHLRC3Q5JS37 347 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 OR52N4Q8NGI2 321 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 PNPLA2Q96AD5 504 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 REG4Q9BYZ8 158 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 TRAV14DV4A0A0A6YYC5 116 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 A6NIZ1 184 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 FCER2P06734 321 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 CXCL12P48061 93 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 RAP1BP61224 184 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 RAP1AP62834 184 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms