RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 JAM3Q9BX67 310 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 TRBV5-3A0A0A0MS03 114 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 COMTD1Q86VU5 262 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF610Q8N9Z0 462 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 OR10K1Q8NGX5 313 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 ZC3HAV1LQ96H79 300 aaKnown RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 DUSP15Q9H1R2 295 aaPredicted RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 C1orf123Q9NWV4 160 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 PLA2G3Q9NZ20 509 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 IGHA2P01877 340 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF728P0DKX0 622 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 RPL23AP62750 156 aaKnown RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 DGCR2P98153 550 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 XAF1Q6GPH4 301 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 OR52I2Q8NH67 350 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 ORAI1Q96D31 301 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 NECAP2Q9NVZ3 263 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 LRRC37A2A6NM11 1700 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 SLC22A23A1A5C7 686 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 GABARAPH6UMI1 98 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 AADACL3Q5VUY0 350 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 SLC22A18ASQ8N1D0 253 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 ZC3H10Q96K80 434 aaKnown RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 UCK1Q9HA47 277 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 P4HTMQ9NXG6 502 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 TPT1P13693 172 aaKnown RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 APEHP13798 732 aaKnown RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 POU4F3Q15319 338 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 RHBDD2Q6NTF9 364 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 C10orf111Q8N326 155 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 SECTM1Q8WVN6 248 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF780AO75290 641 aaPredicted RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 RPP30P78346 268 aaKnown RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 PRSS42Q7Z5A4 293 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 APH1BQ8WW43 257 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 PCYT1BQ9Y5K3 369 aaPredicted RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 CYR61O00622 381 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 TUSC2O75896 110 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 APOC3P02656 99 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 FUCA1P04066 466 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 B4GALT1P15291 398 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 RBP2P50120 134 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF169Q14929 603 aaPredicted RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 CTF1Q16619 201 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF546Q86UE3 836 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 D2HGDHQ8N465 521 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 DECR2Q9NUI1 292 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 MYOTQ9UBF9 498 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 DICER1Q9UPY3 1922 aaKnown RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 FITM1A5D6W6 292 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 ALG1L2C9J202 215 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 PRICKLE3O43900 615 aaPredicted RBP14.97□□□□□ -0.01
SCN3B-202ENST00000392770 FCN2Q15485 313 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 DEFB124Q8NES8 71 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 CASP8AP2Q9UKL3 1982 aa14.97□□□□□ -0.01
SCN3B-202ENST00000392770 SDK1Q7Z5N4 2213 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 SMLR1H3BR10 107 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 WIPI1Q5MNZ9 446 aaPredicted RBP14.96□□□□□ -0.01
SCN3B-202ENST00000392770 CD300LDQ6UXZ3 194 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 SFTPA2Q8IWL1 248 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 CMTM4Q8IZR5 234 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 OR4D11Q8NGI4 311 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 RNF170Q96K19 258 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 TSPAN32Q96QS1 320 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 CCDC163A0A0D9SF12 145 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 RNF212BA8MTL3 300 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 CLVS2Q5SYC1 327 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 OR51S1Q8NGJ8 323 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 OR2G2Q8NGZ5 317 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 ABHD6Q9BV23 337 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 RTL8AQ9BWD3 113 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF768Q9H5H4 540 aaKnown RBP14.96□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF236Q9UL36 1845 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 IFITM5A6NNB3 132 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 TNFSF12O43508 249 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF121P58317 390 aaPredicted RBP14.96□□□□□ -0.01
SCN3B-202ENST00000392770 EIF3IQ13347 325 aaKnown RBP14.96□□□□□ -0.01
SCN3B-202ENST00000392770 OR8B8Q15620 311 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 OR51A2Q8NGJ7 313 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 INTS12Q96CB8 462 aaKnown RBP14.96□□□□□ -0.01
SCN3B-202ENST00000392770 FAM173AQ9BQD7 235 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 PROCRQ9UNN8 238 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 GPANK1O95872 356 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 CHRM2P08172 466 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 SELEP16581 610 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 ASAH1Q13510 395 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 ELFN2Q5R3F8 820 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 LHFPL2Q6ZUX7 228 aa14.96□□□□□ -0.01
SCN3B-202ENST00000392770 SLC22A20A6NK97 555 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 HYAL3O43820 417 aaPredicted RBP14.96□□□□□ -0.02
SCN3B-202ENST00000392770 PRKACAP17612 351 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 DUSP2Q05923 314 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 SIGLEC14Q08ET2 396 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 SSPNQ14714 243 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 ZNF321PQ8N8H1 164 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 SARAFQ96BY9 339 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 ZNF285Q96NJ3 590 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms