RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 NCBP2P52298 156 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 FOXL2P58012 376 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ZP1P60852 638 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 IGLV3-21P80748 117 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 BIKQ13323 160 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 EIF2S3LQ2VIR3 472 aaKnown RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF750Q32MQ0 723 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF385BQ569K4 471 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 FAM69BQ5VUD6 431 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 AADACL4Q5VUY2 407 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 FAM180BQ6P0A1 224 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 SMARCD3Q6STE5 483 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF322Q6U7Q0 402 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 LINGO2Q7L985 606 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 KRT77Q7Z794 578 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ANKRD46Q86W74 232 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ACBD7Q8N6N7 88 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 C15orf54Q8N8G6 183 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 PLPP5Q8NEB5 264 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 DNAAF1Q8NEP3 725 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 BEST4Q8NFU0 473 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 BBS10Q8TAM1 723 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 CCDC107Q8WV48 283 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 CNOT9Q92600 299 aaKnown RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 CNRIP1Q96F85 164 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ART5Q96L15 291 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF681Q96N22 645 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 AMDHD1Q96NU7 426 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 DGAT2Q96PD7 388 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 DDOQ99489 341 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 SLC35A5Q9BS91 424 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 SEMA4CQ9C0C4 833 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 SEBOXQ9HB31 216 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 BCL2L10Q9HD36 194 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ACSS1Q9NUB1 689 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 HAO2Q9NYQ3 351 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 PIPOXQ9P0Z9 390 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 KLHL9Q9P2J3 617 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 UPB1Q9UBR1 384 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 C19orf25Q9UFG5 118 aaPredicted RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 PPIEQ9UNP9 301 aaKnown RBP6.71□□□□□ -1.34
TRBV28-201ENST00000390400 DMRT1Q9Y5R6 373 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 ACACBO00763 2458 aa6.71□□□□□ -1.34
TRBV28-201ENST00000390400 PTPRQQ9UMZ3 2332 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 TRAV6A0A075B6T7 132 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 A0A1W2PS29 197 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ANKRD20A5PA0PJZ0 165 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ARGFXA6NJG6 315 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ANXA2P2A6NMY6 339 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 DISC1C4P0D8 188 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 F5H5P2 479 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 J3QRE1 110 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 TLX2O43763 284 aaPredicted RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 SEMA7AO75326 666 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 CPSF4O95639 269 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 C6orf47O95873 294 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 AGR2O95994 175 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 GKN3PP0CG01 181 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 LIFP15018 202 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 RAB3BP20337 219 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 NT5EP21589 574 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 MMP11P24347 488 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 FPR3P25089 353 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 OTX2P32243 289 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 MPIP34949 423 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 AKR1D1P51857 326 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 EFNA3P52797 238 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 HCCSP53701 268 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 CDH11P55287 796 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 RPS18P62269 152 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 EIF5AP63241 154 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 CRYZQ08257 329 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 HSPB3Q12988 150 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ECH1Q13011 328 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 GAB1Q13480 694 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 GINS1Q14691 196 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ZMYND11Q15326 602 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 RBMS2Q15434 407 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 TGIF1Q15583 401 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ELAVL1Q15717 326 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 CEBPEQ15744 281 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 PNLIPRP3Q17RR3 467 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 PAN3Q58A45 887 aaKnown RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF660Q6AZW8 331 aaPredicted RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 TCTN3Q6NUS6 607 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 JMJD6Q6NYC1 403 aaPredicted RBP6.7□□□□□ -1.34
TRBV28-201ENST00000390400 DRAM2Q6UX65 266 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 LANCL3Q6ZV70 420 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 UTS2BQ765I0 119 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ANKRD37Q7Z713 158 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 VASH2Q86V25 355 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ANGPTL5Q86XS5 388 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 SIAH3Q8IW03 269 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 TMEM151BQ8IW70 566 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF561Q8N587 486 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 KCNRGQ8N5I3 272 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 SAMD12Q8N8I0 201 aa6.7□□□□□ -1.34
TRBV28-201ENST00000390400 ZNF248Q8NDW4 579 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms