RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 SELENOHQ8IZQ5 122 aaKnown RBP-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 FAM133AQ8N9E0 248 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 OR52H1Q8NGJ2 320 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 LMX1AQ8TE12 382 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 PYROXD1Q8WU10 500 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 FCGR1BQ92637 280 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 RAD51AP1Q96B01 352 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 DNAJC30Q96LL9 226 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 PITX2Q99697 317 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 FAIM2Q9BWQ8 316 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 SAMD10Q9BYL1 202 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 COMMD8Q9NX08 183 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 TMCO1Q9UM00 188 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 B9D1Q9UPM9 204 aa-1.14□□□□□ -2.59
SNORA40-201ENST00000388090 LAMA4Q16363 1823 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 FLNCQ14315 2725 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 CELSR1Q9NYQ6 3014 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 NYNRINQ9P2P1 1898 aaKnown RBP-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 A0A1B0GU33 70 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 CLRN2A0PK11 232 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 MBLAC1A4D2B0 266 aaPredicted RBP-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 A8MXQ7 604 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 RGS16O15492 202 aaPredicted RBP-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 KCNK2O95069 426 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 IGHV3-53P01767 116 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 CALM1P0DP23 149 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 CALM2P0DP24 149 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 CALM3P0DP25 149 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 RRASP10301 218 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 NELFEP18615 380 aaKnown RBP-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 SLC2A5P22732 501 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 SLC26A5P58743 744 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 TAS2R43P59537 309 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 MGAT3Q09327 533 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 RCAN2Q14206 197 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 SLC25A35Q3KQZ1 300 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 FA2HQ7L5A8 372 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 TAF8Q7Z7C8 310 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 CLDN19Q8N6F1 224 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 Q8NAQ8 132 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 MS4A4EQ96PG1 132 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 ODF3Q96PU9 254 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 VPS35Q96QK1 796 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 SORT1Q99523 831 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 GSDMCQ9BYG8 508 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 LRRC19Q9H756 370 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 TAS2R5Q9NYW4 299 aa-1.15□□□□□ -2.59
SNORA40-201ENST00000388090 PXDNLA1KZ92 1463 aa-1.16□□□□□ -2.59
SNORA40-201ENST00000388090 IGKV2D-26A0A0A0MRZ7 120 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 OR5B21A6NL26 309 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 CLDN5O00501 218 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 CHMP2AO43633 222 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 AP2A1O95782 977 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 IGHV2-5P01817 119 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 CD37P11049 281 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 RAB3AP20336 220 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 CEACAM3P40198 252 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 MAGEA12P43365 314 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 NAPAP54920 295 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 RPL23P62829 140 aaKnown RBP-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 GABPB1Q06547 395 aaPredicted RBP-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 TOMM20Q15388 145 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 TRIP10Q15642 601 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 C16orf87Q6PH81 154 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 ENPP6Q6UWR7 440 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 ACOT1Q86TX2 421 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 ERO1BQ86YB8 467 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 SLC35F2Q8IXU6 374 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 RNF148Q8N7C7 305 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 OR8K3Q8NH51 312 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 EXOC6Q8TAG9 804 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 ZNF420Q8TAQ5 688 aaPredicted RBP-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 EEF2KMTQ96G04 330 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 SPZ1Q9BXG8 430 aa-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 TDRKHQ9Y2W6 561 aaKnown RBP-1.16□□□□□ -2.6
SNORA40-201ENST00000388090 PTPRZ1P23471 2315 aaPredicted RBP-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 CACNA1BQ00975 2339 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 FAM230AA0A1W2PPH8 454 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 A0A1W2PRV1 198 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 CDC40O60508 579 aaKnown RBP eCLIP-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 TOM1O60784 492 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 EIF3GO75821 320 aaKnown RBP eCLIP-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 MFN2O95140 757 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 NRASP01111 189 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 HRASP01112 189 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 KRASP01116 189 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 FGF1P05230 155 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 IMPDH1P20839 514 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 AHCYP23526 432 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 MMP11P24347 488 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 PSMA2P25787 234 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 HNRNPH3P31942 346 aaKnown RBP-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 QARSP47897 775 aaKnown RBP-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 SYNJ2BPP57105 145 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 OR12D2P58182 307 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 PSG4Q00888 419 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 GGTA1PQ4G0N0 100 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 FAM104BQ5XKR9 115 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 NIPAL3Q6P499 406 aa-1.17□□□□□ -2.6
SNORA40-201ENST00000388090 OR8H3Q8N146 312 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms