RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	OTP	Q5XKR4	325 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	BEST3	Q8N1M1	668 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	C14orf144	Q96I85	54 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	GPR87	Q9BY21	358 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	REG4	Q9BYZ8	158 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	SRR	Q9GZT4	340 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	FKRP	Q9H9S5	495 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	NKIRAS2	Q9NYR9	191 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	COMMD3	Q9UBI1	195 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	PCNX3	Q9H6A9	2034 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	CELSR3	Q9NYQ7	3312 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499		E9PQ18	207 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	HP	P00738	406 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	SERPINA7	P05543	415 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	RAB40AL	P0C0E4	278 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	ANXA3	P12429	323 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	ACVR1B	P36896	505 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	APOBEC1	P41238	236 aa	Known RBP	10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	MLF1	P58340	268 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TMEM225	Q6GV28	225 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	OR5J2	Q8NH18	312 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	OR14L1P	Q8NHC6	308 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	RSRP1	Q9BUV0	290 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TAS2R3	Q9NYW6	316 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	PLA2G3	Q9NZ20	509 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	NUP210L	Q5VU65	1888 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TVP23A	A6NH52	213 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	C21orf140	B9A014	251 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	NPIPA5	E9PKD4	350 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	LRP3	O75074	770 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TXNDC12	O95881	172 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	F12	P00748	615 aa	Predicted RBP	10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	S100A8	P05109	93 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	WNT4	P56705	351 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TIMM50	Q3ZCQ8	353 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	AVPI1	Q5T686	147 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TMEM99	Q8N816	258 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499		Q8NFD4	153 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	GCDH	Q92947	438 aa	Predicted RBP	10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	MISP3	Q96FF7	219 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TMED9	Q9BVK6	235 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	LRFN1	Q9P244	771 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF346	Q9UL40	294 aa	Known RBP	10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	NPIPA1	Q9UND3	350 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SEC14L5	O43304	696 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	IL11	P20809	199 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	POU3F1	Q03052	451 aa	Predicted RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	IL18	Q14116	193 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	EIF2S3L	Q2VIR3	472 aa	Known RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SPINK14	Q6IE38	97 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	NANOGP1	Q8N7R0	232 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	RELL2	Q8NC24	303 aa	Predicted RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	THAP6	Q8TBB0	222 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ALG8	Q9BVK2	526 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SYT4	Q9H2B2	425 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499		A0A1W2PQL4	384 aa	Predicted RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ANXA2P2	A6NMY6	339 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	MAGEB4	O15481	346 aa	Predicted RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	OPCML	Q14982	345 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	OVCH2	Q7RTZ1	564 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	YRDC	Q86U90	279 aa	Known RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF383	Q8NA42	475 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF511	Q8NB15	262 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	BVES	Q8NE79	360 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SVIP	Q8NHG7	77 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ZPLD1	Q8TCW7	415 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SLC39A7	Q92504	469 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ELMOD3	Q96FG2	381 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ZFP64	Q9NPA5	681 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	GTF2A1L	Q9UNN4	478 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499		V9GYH0	126 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	LYRM1	O43325	122 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	STOM	P27105	288 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	RPS19	P39019	145 aa	Known RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	PPT1	P50897	306 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SUMO3	P55854	103 aa	Predicted RBP	10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	ASAH1	Q13510	395 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	LYPD4	Q6UWN0	246 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	PIP4P1	Q86T03	277 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499		Q8N402	240 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	OR2M3	Q8NG83	312 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	GLYATL2	Q8WU03	294 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	IKZF2	Q9UKS7	526 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	HIF3A	Q9Y2N7	669 aa		10.48	□□□□□ -0.73
LMO7-204	ENST00000377499	SULT2B1	O00204	365 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	ALDOB	P05062	364 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	NQO2	P16083	231 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	CDKN2A	P42771	156 aa	Known RBP	10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	CCR6	P51684	374 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	RAB2A	P61019	212 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499		Q0VFX4	171 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	ACKR1	Q16570	336 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	ARL9	Q6T311	187 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	SGCZ	Q96LD1	299 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	CNN2	Q99439	309 aa	Known RBP	10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	NRIP3	Q9NQ35	241 aa		10.47	□□□□□ -0.73
LMO7-204	ENST00000377499	LALBA	P00709	142 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms