RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 DNAJC25-GNG10A0A024R161 153 aa13.61□□□□□ -0.23
LMX1B-201ENST00000355497 CDK5Q00535 292 aa13.61□□□□□ -0.23
LMX1B-201ENST00000355497 SYT14P1Q58G82 188 aa13.61□□□□□ -0.23
LMX1B-201ENST00000355497 MAVSQ7Z434 540 aa13.61□□□□□ -0.23
LMX1B-201ENST00000355497 EDAQ92838 391 aa13.61□□□□□ -0.23
LMX1B-201ENST00000355497 LIN7CQ9NUP9 197 aaKnown RBP13.61□□□□□ -0.23
LMX1B-201ENST00000355497 TIMM10BQ9Y5J6 103 aa13.61□□□□□ -0.23
LMX1B-201ENST00000355497 SIRPB1O00241 398 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 OR2J3O76001 311 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 RAF1P04049 648 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 PCK2Q16822 640 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 SAXO2Q658L1 398 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 OLIG3Q7RTU3 272 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 DHRS9Q9BPW9 319 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 HRH3Q9Y5N1 445 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 GPX2P18283 190 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 TGM1P22735 817 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 SOX18P35713 384 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 MFSD4AQ8N468 514 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 OPALINQ96PE5 141 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 OR2A14Q96R47 310 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 A0A0A6YYJ9 748 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 FUCA1P04066 466 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 GUSBP08236 651 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 RAD52P43351 418 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 ZNF787Q6DD87 383 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 TMEM81Q6P7N7 255 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 DHRS4L2Q6PKH6 230 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 TMEM99Q8N816 258 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 UBAC2Q8NBM4 344 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 ATOH1Q92858 354 aaPredicted RBP13.6□□□□□ -0.23
LMX1B-201ENST00000355497 CTSFQ9UBX1 484 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 ZC3H12DA2A288 527 aaKnown RBP13.6□□□□□ -0.23
LMX1B-201ENST00000355497 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
LMX1B-201ENST00000355497 IGHV3-9P01782 118 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 RPUSD3Q6P087 351 aaKnown RBP13.6□□□□□ -0.23
LMX1B-201ENST00000355497 ST8SIA4Q92187 359 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 CHST2Q9Y4C5 530 aa13.6□□□□□ -0.23
LMX1B-201ENST00000355497 USF1P22415 310 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-201ENST00000355497 CD80P33681 288 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 H3F3AP84243 136 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 DGCR2P98153 550 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 EMC4Q5J8M3 183 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 OR2M7Q8NG81 312 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 SLC17A4Q9Y2C5 497 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 B4GALT3O60512 393 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 ALX3O95076 343 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 LDLRAD1Q5T700 205 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 NKAIN4Q8IVV8 208 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 THOC3Q96J01 351 aaKnown RBP13.59□□□□□ -0.23
LMX1B-201ENST00000355497 GAREM1Q9H706 876 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 SIT1Q9Y3P8 196 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 FAM166BA8MTA8 275 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 M0R082 166 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 ST8SIA2Q92186 375 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 RPUSD4Q96CM3 377 aaKnown RBP13.59□□□□□ -0.23
LMX1B-201ENST00000355497 SEMA4CQ9C0C4 833 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 DLL4Q9NR61 685 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 DBX1A6NMT0 343 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 E5RGE8 158 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
LMX1B-201ENST00000355497 TOX4O94842 621 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 SLC25A6P12236 298 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 NPPBP16860 134 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 RPL12P30050 165 aaKnown RBP13.59□□□□□ -0.23
LMX1B-201ENST00000355497 ARR3P36575 388 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 OR1D5P58170 312 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 OR2B11Q5JQS5 317 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 LIPNQ5VXI9 398 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 HLA-CQ95604 372 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 CCDC74AQ96AQ1 378 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 NSG2Q9Y328 171 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 HCFC2Q9Y5Z7 792 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
LMX1B-201ENST00000355497 OR5I1Q13606 314 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 ACKR1Q16570 336 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 TMED6Q8WW62 240 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 CRYGNQ8WXF5 182 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 PTDSS2Q9BVG9 487 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 TMEM231Q9H6L2 316 aa13.59□□□□□ -0.23
LMX1B-201ENST00000355497 A0A1B0GTW7 788 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 QDPRP09417 244 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 PSMB6P28072 239 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 RBM45Q8IUH3 476 aaKnown RBP13.58□□□□□ -0.23
LMX1B-201ENST00000355497 PLA2G12AQ9BZM1 189 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 PLEKHA2Q9HB19 425 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 KCNG2Q9UJ96 466 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 HS3ST3A1Q9Y663 406 aa13.58□□□□□ -0.23
LMX1B-201ENST00000355497 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 RAB5AP20339 215 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 TBXA2RP21731 343 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 DUSP5Q16690 384 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 CHRDL1Q9BU40 450 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 CTDSP1Q9GZU7 261 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 P2RY12Q9H244 342 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms