RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 FCRL6Q6DN72 434 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 MIB2Q96AX9 1013 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 DNTTIP1Q9H147 329 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 OBP2BQ9NPH6 170 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 DLL4Q9NR61 685 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF346Q9UL40 294 aaKnown RBP11.18□□□□□ -0.62
COLCA1-201ENST00000355430 MEIKINA0A087WXM9 373 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 EPOPA6NHQ4 379 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 D6RAR5 112 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 CLDN17P56750 224 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 GSG1Q2KHT4 349 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 DCXRQ7Z4W1 244 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 OR4N2Q8NGD1 307 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 CHAC2Q8WUX2 184 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 S100PBPQ96BU1 408 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 KIF25Q9UIL4 384 aa11.18□□□□□ -0.62
COLCA1-201ENST00000355430 COA3Q9Y2R0 106 aaPredicted RBP11.18□□□□□ -0.62
COLCA1-201ENST00000355430 CD3DP04234 171 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SNRNP70P08621 437 aaKnown RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 RPS23P62266 143 aaKnown RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 BTG2P78543 158 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 RHOUQ7L0Q8 258 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SPRED2Q7Z698 418 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 KDM8Q8N371 416 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 APH1AQ96BI3 265 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 RAB3CQ96E17 227 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF649Q9BS31 505 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 TAS2R5Q9NYW4 299 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 LCTP09848 1927 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SLC6A1P30531 599 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 RPL18Q07020 188 aaKnown RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 OR4C16Q8NGL9 310 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 NT5CQ8TCD5 201 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 OR51B6Q9H340 312 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 DECR2Q9NUI1 292 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 FBXO34Q9NWN3 711 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 MRPS28Q9Y2Q9 187 aaKnown RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 EIF4E2O60573 245 aaKnown RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 TUBG1P23258 451 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 DOC2BQ14184 412 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 OR2L13Q8N349 312 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 OR2AK2Q8NG84 335 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SULT4A1Q9BR01 284 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 SLCO5A1Q9H2Y9 848 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 PYCARD-AS1I3L0S3 204 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 AKR1C2P52895 323 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 GPR85P60893 370 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 AKR1C1Q04828 323 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 EBPQ15125 230 aaKnown RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 C2orf76Q3KRA6 126 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 GLDNQ6ZMI3 551 aaPredicted RBP11.17□□□□□ -0.62
COLCA1-201ENST00000355430 TMPRSS11FQ6ZWK6 438 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 UBE3DQ7Z6J8 389 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 MARC2Q969Z3 335 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 TRIB1Q96RU8 372 aa11.17□□□□□ -0.62
COLCA1-201ENST00000355430 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 NME2P22392 152 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 CAV2P51636 162 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 SSPNQ14714 243 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 PRSS53Q2L4Q9 553 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 FJX1Q86VR8 437 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 SCGB1C1Q8TD33 95 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 APOBEC4Q8WW27 367 aaKnown RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 PELI1Q96FA3 418 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 ZC3HAV1LQ96H79 300 aaKnown RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 DIRAS3O95661 229 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 RPL27P61353 136 aaKnown RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 MEX3BQ6ZN04 569 aaKnown RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 OR5D18Q8NGL1 313 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 OR5M1Q8NGP8 315 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 RSPRY1Q96DX4 576 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 TMEM59Q9BXS4 323 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 NKX6-2Q9C056 277 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 C1orf198Q9H425 327 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 RAB22AQ9UL26 194 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 FOXJ3Q9UPW0 622 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 SLC22A13Q9Y226 551 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 URB1O60287 2271 aaKnown RBP11.16□□□□□ -0.62
COLCA1-201ENST00000355430 LEUTXA8MZ59 168 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 SULT1C2O00338 296 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 MAGEB1P43366 347 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 ARL6IP1Q15041 203 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 LYPD8Q6UX82 237 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 C17orf107Q6ZR85 190 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 CDH26Q8IXH8 852 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 BOD1Q96IK1 185 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 SYT3Q9BQG1 590 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 PLXNA1Q9UIW2 1896 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms