RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 FAM221AA4D161 298 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 H0Y8G0 127 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 LGALS8O00214 317 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 UPK1AO00322 258 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 SH2D1BO14796 132 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 TFAP2EQ6VUC0 442 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 UBALD2Q8IYN6 164 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 FBXL6Q8N531 539 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 IP6K3Q96PC2 410 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 YIF1AO95070 293 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ALOX5APP20292 161 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 KIR2DS4P43632 304 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 RHOUQ7L0Q8 258 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 KLHDC8BQ8IXV7 354 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 GPR84Q9NQS5 396 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 CMC2Q9NRP2 79 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 MTCH1Q9NZJ7 389 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ETHE1O95571 254 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 CXCL10P02778 98 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 LAP3P28838 519 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 RAC1P63000 192 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 SPEM1Q8N4L4 309 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 RNF141Q8WVD5 230 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ROBO4Q8WZ75 1007 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
SCN8A-202ENST00000355133 PATZ1Q9HBE1 687 aaKnown RBP12.03□□□□□ -0.48
SCN8A-202ENST00000355133 SMCO4Q9NRQ5 59 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 C4AP0C0L4 1744 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 LRP5LA4QPB2 252 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 F6UZH7 168 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 CRYAAP02489 173 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 FOXC1Q12948 553 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 LAIR1Q6GTX8 287 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 REEP6Q96HR9 211 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 OXGR1Q96P68 337 aa12.02□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF816-ZNF321PA0A0X1KG74 233 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 RAB13P51153 203 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 CYHR1Q6ZMK1 362 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 ZNF321PQ8N8H1 164 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 EXD3Q8N9H8 876 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 OR13C5Q8NGS8 318 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 OLIG1Q8TAK6 271 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
SCN8A-202ENST00000355133 OSGIN2Q9Y236 505 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 CBR1P16152 277 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 PRPH2P23942 346 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 RPL34P49207 117 aaKnown RBP12.02□□□□□ -0.49
SCN8A-202ENST00000355133 CLN3Q13286 438 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 ADIRFQ15847 76 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 EMC4Q5J8M3 183 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 SLC25A21Q9BQT8 299 aaPredicted RBP12.02□□□□□ -0.49
SCN8A-202ENST00000355133 ZCCHC4Q9H5U6 513 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 ISYNA1Q9NPH2 558 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 MEIKINA0A087WXM9 373 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 TMEM129A0AVI4 362 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 LHX8Q68G74 356 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 OR6K3Q8NGY3 331 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 OR52I2Q8NH67 350 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 C3orf49Q96BT1 292 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 PKMYT1Q99640 499 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 B3GALT5Q9Y2C3 310 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 POLDIP2Q9Y2S7 368 aa12.02□□□□□ -0.49
SCN8A-202ENST00000355133 NRASP01111 189 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 RAB5CP51148 216 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 INSM1Q01101 510 aaPredicted RBP12.01□□□□□ -0.49
SCN8A-202ENST00000355133 ANKRD34AQ69YU3 496 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 PLXDC2Q6UX71 529 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 CAMKMTQ7Z624 323 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 ST8SIA1Q92185 356 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 SLC35B4Q969S0 331 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 IL21Q9HBE4 155 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 HRO43593 1189 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 HPNP05981 417 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 HLA-BQ31612 363 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 SOHLH1Q5JUK2 328 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 FAM199XQ6PEV8 388 aaPredicted RBP12.01□□□□□ -0.49
SCN8A-202ENST00000355133 FAM109AQ8N4B1 249 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 CISD2Q8N5K1 135 aaKnown RBP12.01□□□□□ -0.49
SCN8A-202ENST00000355133 GPR119Q8TDV5 335 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 SLC25A46Q96AG3 418 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 TMEM43Q9BTV4 400 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 LTB4R2Q9NPC1 389 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 SLC23A1Q9UHI7 598 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
SCN8A-202ENST00000355133 ABCD4O14678 606 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 HOXD12P35452 270 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 PSMB3P49720 205 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 ISL1P61371 349 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 CTU2Q2VPK5 515 aaKnown RBP12.01□□□□□ -0.49
SCN8A-202ENST00000355133 LHFPL2Q6ZUX7 228 aa12.01□□□□□ -0.49
SCN8A-202ENST00000355133 C15orf54Q8N8G6 183 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms