RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 GLRX2Q9NS18 164 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 OR52A1Q9UKL2 312 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 EMC9Q9Y3B6 208 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 CACNA1CQ13936 2221 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 FRYQ5TBA9 3013 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 TRBV5-5A0A0J9YX44 114 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 RER1O15258 196 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 CST2P09228 141 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 OCM2P0CE71 109 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 DCTN2Q13561 401 aaKnown RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 NRN1LQ496H8 165 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 BCL2L15Q5TBC7 163 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 TSPO2Q5TGU0 170 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 LRRC18Q8N456 261 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 IL17RDQ8NFM7 739 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 ABHD17AQ96GS6 310 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 DERL3Q96Q80 235 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 PLEKHB1Q9UF11 243 aaPredicted RBP16.45■□□□□ 0.22
PTN-201ENST00000348225 LHX6Q9UPM6 363 aa16.45■□□□□ 0.22
PTN-201ENST00000348225 PHF3Q92576 2039 aaKnown RBP16.44■□□□□ 0.22
PTN-201ENST00000348225 SMIM30A4D0T7 59 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 OR14I1A6ND48 311 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 ZNF587BE7ETH6 402 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 TAF4O00268 1085 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 TGM6O95932 706 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 PSMA6P60900 246 aaKnown RBP16.44■□□□□ 0.22
PTN-201ENST00000348225 ZNF704Q6ZNC4 412 aaPredicted RBP16.44■□□□□ 0.22
PTN-201ENST00000348225 LINGO2Q7L985 606 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.44■□□□□ 0.22
PTN-201ENST00000348225 BORCS5Q969J3 196 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 NOX4Q9NPH5 578 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 PNRC2Q9NPJ4 139 aaKnown RBP16.44■□□□□ 0.22
PTN-201ENST00000348225 DDX28Q9NUL7 540 aaKnown RBP16.44■□□□□ 0.22
PTN-201ENST00000348225 SLC22A13Q9Y226 551 aa16.44■□□□□ 0.22
PTN-201ENST00000348225 ACACAQ13085 2346 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 A0A1W2PPK0 400 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 ACOD1A6NK06 481 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 RPL36A-HNRNPH2H7BZ11 118 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 K7EM74 188 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 RAF1P04049 648 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 ADRB1P08588 477 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 UBCP0CG48 685 aaKnown RBP16.43■□□□□ 0.22
PTN-201ENST00000348225 RAB3BP20337 219 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 ID4P47928 161 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 HIST1H3AP68431 136 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 ODF4Q2M2E3 257 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 HIST2H3PS2Q5TEC6 136 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 HIST2H3AQ71DI3 136 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 ADGRE4PQ86SQ3 457 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 ZNF100Q8IYN0 542 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 TSEN15Q8WW01 171 aaKnown RBP16.43■□□□□ 0.22
PTN-201ENST00000348225 GMPPAQ96IJ6 420 aaPredicted RBP16.43■□□□□ 0.22
PTN-201ENST00000348225 CEP19Q96LK0 163 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 WACQ9BTA9 647 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 SLITRK2Q9H156 845 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 G6PC2Q9NQR9 355 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 SLC7A10Q9NS82 523 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 FAM206AQ9NX38 181 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 CLCF1Q9UBD9 225 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 UPB1Q9UBR1 384 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 TP53TG5Q9Y2B4 290 aa16.43■□□□□ 0.22
PTN-201ENST00000348225 A0A087WV48 116 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 PDCD5O14737 125 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 RGS5O15539 181 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 NCR1O76036 304 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 FARS2O95363 451 aaKnown RBP16.42■□□□□ 0.22
PTN-201ENST00000348225 ISG15P05161 165 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 BMP4P12644 408 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 B4GALT1P15291 398 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 AGTR1P30556 359 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 CAV3P56539 151 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 SCRN3Q0VDG4 424 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 TMEM244Q5VVB8 128 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 ABHD12BQ7Z5M8 362 aaPredicted RBP16.42■□□□□ 0.22
PTN-201ENST00000348225 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 SLC22A24Q8N4F4 322 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 EXTL1Q92935 676 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 TRIB1Q96RU8 372 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 ATF6BQ99941 703 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 RAXQ9Y2V3 346 aa16.42■□□□□ 0.22
PTN-201ENST00000348225 SS18L1O75177 396 aaPredicted RBP16.41■□□□□ 0.22
PTN-201ENST00000348225 IGHV3-9P01782 118 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 ACHEP22303 614 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 SOX2P48431 317 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 PCBD1P61457 104 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 SF3B4Q15427 424 aaKnown RBP eCLIP16.41■□□□□ 0.22
PTN-201ENST00000348225 PLEKHN1Q494U1 663 aaPredicted RBP16.41■□□□□ 0.22
PTN-201ENST00000348225 ELFN2Q5R3F8 820 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 ZNF813Q6ZN06 617 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 RDH10Q8IZV5 341 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 ACOT12Q8WYK0 555 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 KCNJ15Q99712 375 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 SH3GL3Q99963 347 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 HHLA2Q9UM44 414 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 CMAHPQ9Y471 501 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 CEP295Q9C0D2 2601 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 AHRRA9YTQ3 701 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 PIN1P1O15428 100 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 APOC1P02654 83 aa16.41■□□□□ 0.22
PTN-201ENST00000348225 SRMP19623 302 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms