RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 OR5M9Q8NGP3 310 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 OR2AJ1Q8NGZ0 328 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 RGP1Q92546 391 aaPredicted RBP9.65□□□□□ -0.86
ECM1-201ENST00000346569 PHYHIPQ92561 330 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 WNT2BQ93097 391 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 PPP1R14AQ96A00 147 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 FBXO17Q96EF6 278 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 GMPPAQ96IJ6 420 aaPredicted RBP9.65□□□□□ -0.86
ECM1-201ENST00000346569 FOXB1Q99853 325 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 BARHL1Q9BZE3 327 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 NIPAL2Q9H841 368 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 G6PC2Q9NQR9 355 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 CENPMQ9NSP4 180 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 GALNT8Q9NY28 637 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 CCDC59Q9P031 241 aaKnown RBP9.65□□□□□ -0.86
ECM1-201ENST00000346569 FBXL3Q9UKT7 428 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 R4GMQ9 66 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 BSNQ9UPA5 3926 aa9.65□□□□□ -0.86
ECM1-201ENST00000346569 ARPC4-TTLL3A0A0A6YYG9 625 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 TRBV5-5A0A0J9YX44 114 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 TMEM212A6NML5 194 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 INHBBP09529 407 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 UCHL1P09936 223 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 H2BFMP0C1H6 154 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 FCGR2AP12318 317 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 PAX7P23759 505 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 AGTR1P30556 359 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 FOXG1P55316 489 aaPredicted RBP9.65□□□□□ -0.87
ECM1-201ENST00000346569 CCDC92Q53HC0 331 aaPredicted RBP9.65□□□□□ -0.87
ECM1-201ENST00000346569 YIF1BQ5BJH7 314 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 WDR38Q5JTN6 314 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 FAM27D1Q5T7N8 215 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 NSUN5P2Q63ZY6 315 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 PAMR1Q6UXH9 720 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 SPATC1Q76KD6 591 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 SYT9Q86SS6 491 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 SLC22A24Q8N4F4 322 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 OR13C5Q8NGS8 318 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 OR5AK2Q8NH90 309 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 SLC25A46Q96AG3 418 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 ALKBH3Q96Q83 286 aaPredicted RBP9.65□□□□□ -0.87
ECM1-201ENST00000346569 WACQ9BTA9 647 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 KCNN2Q9H2S1 579 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 MMP27Q9H306 513 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 ZNF71Q9NQZ8 489 aaPredicted RBP9.65□□□□□ -0.87
ECM1-201ENST00000346569 DDX28Q9NUL7 540 aaKnown RBP9.65□□□□□ -0.87
ECM1-201ENST00000346569 FAM206AQ9NX38 181 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 SLC22A13Q9Y226 551 aa9.65□□□□□ -0.87
ECM1-201ENST00000346569 FREM1Q5H8C1 2179 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 A0A075B6Q4 140 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 TRAV1-2A0A0B4J238 106 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 ZNF878C9JN71 531 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 PIN1P1O15428 100 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 OTX1P32242 354 aaPredicted RBP9.64□□□□□ -0.87
ECM1-201ENST00000346569 MAGEB1P43366 347 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 OR3A2P47893 321 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 MTNR1BP49286 362 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 ARF1P84077 181 aaKnown RBP9.64□□□□□ -0.87
ECM1-201ENST00000346569 MFGE8Q08431 387 aaPredicted RBP9.64□□□□□ -0.87
ECM1-201ENST00000346569 MOGQ16653 247 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 ZNF404Q494X3 552 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 ACSF3Q4G176 576 aaPredicted RBP9.64□□□□□ -0.87
ECM1-201ENST00000346569 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.64□□□□□ -0.87
ECM1-201ENST00000346569 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 RDH10Q8IZV5 341 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 LRRC18Q8N456 261 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 OR6Q1Q8NGQ2 317 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 APH1AQ96BI3 265 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 TRIB1Q96RU8 372 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 SH3GL3Q99963 347 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 ZCCHC4Q9H5U6 513 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 SNTG1Q9NSN8 517 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 LUZP4Q9P127 313 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 PLEKHB1Q9UF11 243 aaPredicted RBP9.64□□□□□ -0.87
ECM1-201ENST00000346569 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
ECM1-201ENST00000346569 GTF3C1Q12789 2109 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 TMEM269A0A1B0GVZ9 245 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 IGHV3-9P01782 118 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 ISG15P05161 165 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 KIR2DL2P43627 348 aaPredicted RBP9.63□□□□□ -0.87
ECM1-201ENST00000346569 RORCP51449 518 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 TDGF1P3P51864 188 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 SF3B4Q15427 424 aaKnown RBP eCLIP9.63□□□□□ -0.875e-7■■■□□ 18.9
ECM1-201ENST00000346569 Q499Y3 187 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 ELFN2Q5R3F8 820 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 FBXW9Q5XUX1 488 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 RTL6Q6ICC9 239 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 FAM180AQ6UWF9 173 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 SEM1Q6ZVN7 128 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 FAM214BQ7L5A3 538 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 PRSS45Q7RTY3 260 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 P4HA3Q7Z4N8 544 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 ZNF100Q8IYN0 542 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 ELMOD2Q8IZ81 293 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 CISD2Q8N5K1 135 aaKnown RBP9.63□□□□□ -0.87
ECM1-201ENST00000346569 ZNF676Q8N7Q3 588 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 C9orf106Q8NAJ2 232 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms