RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 NSMAFQ92636 917 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TMEM41AQ96HV5 264 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 RBM14Q96PK6 669 aaKnown RBP8.21□□□□□ -1.09
ATG4A-202ENST00000345734 MNTQ99583 582 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 ELOVL3Q9HB03 270 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 B3GAT2Q9NPZ5 323 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 DEPPQ9NTK1 212 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 PRR13Q9NZ81 148 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 FBXL7Q9UJT9 491 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF281Q9Y2X9 895 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 HDGFL3Q9Y3E1 203 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF175Q9Y473 711 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TMEM14AQ9Y6G1 99 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 PRRC2CQ9Y520 2896 aaKnown RBP8.21□□□□□ -1.09
ATG4A-202ENST00000345734 MUC6Q6W4X9 2439 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ISPDA4D126 451 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 FABP12A6NFH5 140 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ACOD1A6NK06 481 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ATP6V1G2-DDX39BF2Z307 99 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 H3BSH0 61 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 PIN1P1O15428 100 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 TRAF3IP2O43734 574 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-202ENST00000345734 CBR3O75828 277 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 SERPINA3P01011 423 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 RFPL3SP0C7P2 107 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 THBS2P35442 1172 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 OC90Q02509 493 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-202ENST00000345734 GLO1Q04760 184 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ALKBH1Q13686 389 aaKnown RBP8.21□□□□□ -1.1
ATG4A-202ENST00000345734 BAK1Q16611 211 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ODF4Q2M2E3 257 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 SLC18B1Q6NT16 456 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 SFXN4Q6P4A7 337 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 FAM131AQ6UXB0 335 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 UNQ9370/PRO34162Q6UXP9 181 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 OR8H2Q8N162 312 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 PRSS35Q8N3Z0 413 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 TEX19Q8NA77 164 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ADPRHL1Q8NDY3 354 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ENKURQ8TC29 256 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 ADAMTS17Q8TE56 1095 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 MIB2Q96AX9 1013 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 SGK3Q96BR1 496 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 OR8B4Q96RC9 309 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 SRRQ9GZT4 340 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 NOX4Q9NPH5 578 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 TIGARQ9NQ88 270 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 KLHL13Q9P2N7 655 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 RAXQ9Y2V3 346 aa8.21□□□□□ -1.1
ATG4A-202ENST00000345734 NCOA6Q14686 2063 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-202ENST00000345734 IGHV3-15A0A0B4J1V0 119 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PINLYPA6NC86 204 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 LRRC3CA6NJW4 275 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 AQP7P3A6NL99 342 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 STMND1H3BQB6 276 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 AQP7O14520 342 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PHYHO14832 338 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 GPRIN2O60269 458 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 UCHL1P09936 223 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 FTH1P19P0C7X4 201 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SLC2A2P11168 524 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 CYB561P49447 251 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PPP3R1P63098 170 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SLC35A1P78382 337 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 EIF2B1Q14232 305 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SLC17A1Q14916 467 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 CARD17Q5XLA6 110 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 HBMQ6B0K9 141 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 TMEM225Q6GV28 225 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SPINK14Q6IE38 97 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 CNIH2Q6PI25 160 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PAMR1Q6UXH9 720 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 YRDCQ86U90 279 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 RAB43Q86YS6 212 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 LINC00346Q8IVM7 164 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 RDH10Q8IZV5 341 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 POC5Q8NA72 575 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PRSS33Q8NF86 280 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SLC26A10Q8NG04 563 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 OR2G2Q8NGZ5 317 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 OXGR1Q96P68 337 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 MRPL13Q9BYD1 178 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SLC25A18Q9H1K4 315 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 MALT1Q9UDY8 824 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 RASD1Q9Y272 281 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 TRAPPC4Q9Y296 219 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 AK6Q9Y3D8 172 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 UGT2A1Q9Y4X1 527 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 DNAJC13O75165 2243 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 RTTNQ86VV8 2226 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 TRAV1-2A0A0B4J238 106 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 TRABD2BA6NFA1 517 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 OR6C65A6NJZ3 312 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 OR4C45A6NMZ5 311 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF879B4DU55 563 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 KHDRBS3O75525 346 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 GATBO75879 557 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PGA4P0DJD7 388 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 PGA3P0DJD8 388 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms