RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CLCC1Q96S66 551 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 LPAR4Q99677 370 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 MICU1Q9BPX6 476 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 SYT4Q9H2B2 425 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 CKLFQ9UBR5 152 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 GHRLQ9UBU3 117 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 SLC22A13Q9Y226 551 aa8.69□□□□□ -1.02
HOXA1-201ENST00000343060 DOCK9Q9BZ29 2069 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 A0A1W2PPE3 182 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 C5orf51A6NDU8 294 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CEACAM18A8MTB9 384 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 H7C1C5 153 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 RAB27BO00194 218 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 HTR3BO95264 441 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 PNPP00491 289 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 SPTBP11277 2137 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 RPS27P42677 84 aaKnown RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 SULT1A2P50226 295 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 PPT1P50897 306 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 LCN6P62502 163 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 RPL18Q07020 188 aaKnown RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 MEP1BQ16820 701 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 DHRS11Q6UWP2 260 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 TMPPEQ6ZT21 453 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CD163Q86VB7 1156 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 TMEM41AQ96HV5 264 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 NKX3-1Q99801 234 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 NAA11Q9BSU3 229 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 SLC5A7Q9GZV3 580 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 LAT2Q9GZY6 243 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 HRH4Q9H3N8 390 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 GDE1Q9NZC3 331 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 DNAJB11Q9UBS4 358 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CGGBP1Q9UFW8 167 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 GDF2Q9UK05 429 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 ANAPC10Q9UM13 185 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 KPTNQ9Y664 436 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 C9JQL5 133 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 PRAMEF26H0Y7S4 382 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 WRBO00258 174 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 PQBP1O60828 265 aaKnown RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CSN2P05814 226 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CD2P06729 351 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 OR8U8P0C7N1 319 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 DVL1P1P54792 670 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 EIF5AP63241 154 aaKnown RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 DEFB103AP81534 67 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 ENPP2Q13822 863 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 FNDC7Q5VTL7 733 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 WBP2NLQ6ICG8 309 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF585AQ6P3V2 769 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 KCTD9Q7L273 389 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 RTL10Q7L3V2 364 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 MAMDC2Q7Z304 686 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 TRAPPC6BQ86SZ2 158 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 TMEFF1Q8IYR6 380 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 NKAIN3Q8N8D7 197 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CASTOR1Q8WTX7 329 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 CPNE2Q96FN4 548 aaPredicted RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 NUDT16L1Q9BRJ7 211 aaKnown RBP8.68□□□□□ -1.02
HOXA1-201ENST00000343060 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 RAB18Q9NP72 206 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 PARP11Q9NR21 331 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 GRHPRQ9UBQ7 328 aa8.68□□□□□ -1.02
HOXA1-201ENST00000343060 FITM1A5D6W6 292 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 SRSF10O75494 262 aaKnown RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 CLN5O75503 358 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 F13BP05160 661 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 CBR1P16152 277 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 VAMP1P23763 118 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 CPT2P23786 658 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 RAB38P57729 211 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 EGR4Q05215 589 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 MFGE8Q08431 387 aaPredicted RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 FABP9Q0Z7S8 132 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 RBM39Q14498 530 aaKnown RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 SGCAQ16586 387 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 DEFB115Q30KQ5 88 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 EIF5AL1Q6IS14 154 aaKnown RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 DTWD2Q8NBA8 298 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 OR5T3Q8NGG3 340 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 SUSD6Q92537 303 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 C8orf44Q96CB5 159 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 NECAB3Q96P71 396 aaPredicted RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 CMKLR1Q99788 373 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 ADAM19Q9H013 955 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 ZMAT3Q9HA38 289 aaKnown RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 PDE7BQ9NP56 450 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 DEC1Q9P2X7 70 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
HOXA1-201ENST00000343060 MRPS33Q9Y291 106 aaKnown RBP8.67□□□□□ -1.02
HOXA1-201ENST00000343060 TAAR5O14804 337 aa8.66□□□□□ -1.02
HOXA1-201ENST00000343060 PPIHO43447 177 aaKnown RBP8.66□□□□□ -1.02
HOXA1-201ENST00000343060 CSTBP04080 98 aaKnown RBP8.66□□□□□ -1.02
HOXA1-201ENST00000343060 INHAP05111 366 aa8.66□□□□□ -1.02
HOXA1-201ENST00000343060 HRH1P35367 487 aa8.66□□□□□ -1.02
HOXA1-201ENST00000343060 IL15RAQ13261 267 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms