RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SLC17A1Q14916 467 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 IAH1Q2TAA2 248 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 PLEKHN1Q494U1 663 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 LAMTOR1Q6IAA8 161 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 CD200R1LQ6Q8B3 271 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 TRILQ7L0X0 811 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 OR5T1Q8NG75 326 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 ADAMTS18Q8TE60 1221 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 KCNE5Q9UJ90 142 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 ELF5Q9UKW6 265 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 SCML1Q9UN30 329 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 PUS1Q9Y606 427 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 FAM221AA4D161 298 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 HSPB6O14558 160 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SNAPINO95295 136 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 PDZK1IP1Q13113 114 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 CD226Q15762 336 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF74Q16587 644 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ADAM5Q6NVV9 412 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 PLXDC1Q8IUK5 500 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 PRR18Q8N4B5 295 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SUMF1Q8NBK3 374 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 MMP25Q9NPA2 562 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ZFP64Q9NPA5 681 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 DKKL1Q9UK85 242 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SIP14410 1827 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SLC22A23A1A5C7 686 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 METTL12A8MUP2 240 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 MPC2O95563 127 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ATP1B3P54709 279 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ACY1Q03154 408 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 NPEPL1Q8NDH3 523 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 MR1Q95460 341 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 OR51B6Q9H340 312 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 EMC3Q9P0I2 261 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ASH2LQ9UBL3 628 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 MTFP1Q9UDX5 166 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF230Q9UIE0 474 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ZMIZ1Q9ULJ6 1067 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ARHGEF17Q96PE2 2063 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 TRBV11-1A0A0K0K1C0 115 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 C7orf66A4D0T2 115 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SPINT1O43278 529 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 APOC1P02654 83 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 DBHP09172 617 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 FCGR2AP12318 317 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 NAT1P18440 290 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 CXCL2P19875 107 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 KLF9Q13886 244 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 TOMM34Q15785 309 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 USF2Q15853 346 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 CDONQ4KMG0 1287 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 KCNRGQ8N5I3 272 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 OR11G2Q8NGC1 345 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 OR51A2Q8NGJ7 313 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF285Q96NJ3 590 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 KCNJ15Q99712 375 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 DNTTIP1Q9H147 329 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 KCNJ16Q9NPI9 418 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 POLE3Q9NRF9 147 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 FGF21Q9NSA1 209 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 A8MVM7 634 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 K7EPK0 472 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 CTAG2O75638 210 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 RAD51DO75771 328 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 OR1D5P58170 312 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 FAM189A2Q15884 450 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 RNF141Q8WVD5 230 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 SLC46A1Q96NT5 459 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 GAREM1Q9H706 876 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 TMEM74BQ9NUR3 256 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 KLHL13Q9P2N7 655 aa11.24□□□□□ -0.61
SNRNP48-201ENST00000342415 PRSS37A4D1T9 235 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 A6NIZ1 184 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 DCTN6O00399 190 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 PLRG1O43660 514 aaKnown RBP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 F10P00742 488 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 EPHA1P21709 976 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 DRD1P21728 446 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 PRSS12P56730 875 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 RAP1BP61224 184 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 RAP1AP62834 184 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 HTRA4P83105 476 aaPredicted RBP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 DHRS2Q13268 280 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 DCAF12L2Q5VW00 463 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 WNT2BQ93097 391 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 ZIC2O95409 532 aaPredicted RBP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 COL9A1P20849 921 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 CD38P28907 300 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 YPEL5P62699 121 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 PPA1Q15181 289 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 PHLDA2Q53GA4 152 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 MCEMP1Q8IX19 187 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 SHISA5Q8N114 240 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 SLC22A24Q8N4F4 322 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms