RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PAQR4Q8N4S7 273 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-202ENST00000331450 OR2AJ1Q8NGZ0 328 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 FBLIM1Q8WUP2 373 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 RADILQ96JH8 1075 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
LRRC28-202ENST00000331450 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 YIPF3Q9GZM5 350 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 CLEC4MQ9H2X3 399 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-202ENST00000331450 DDX28Q9NUL7 540 aaKnown RBP13.89□□□□□ -0.19
LRRC28-202ENST00000331450 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.89□□□□□ -0.19
LRRC28-202ENST00000331450 KLHDC2Q9Y2U9 406 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 CELSR2Q9HCU4 2923 aa13.89□□□□□ -0.19
LRRC28-202ENST00000331450 HECTD1Q9ULT8 2610 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 TMCC2O75069 709 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
LRRC28-202ENST00000331450 SBK2P0C263 348 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 CCL2P13500 99 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 APLNRP35414 380 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 HTR5AP47898 357 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 HSPA13P48723 471 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 HGFACQ04756 655 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 TBC1D28Q2M2D7 210 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 KRTAP27-1Q3LI81 207 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 C8orf59Q8N0T1 100 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-202ENST00000331450 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-202ENST00000331450 OR1F12Q8NHA8 337 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 AMELYQ99218 206 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 COQ7Q99807 217 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 ATF6BQ99941 703 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 ABHD6Q9BV23 337 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 CLN6Q9NWW5 311 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 CADP27708 2225 aa13.88□□□□□ -0.19
LRRC28-202ENST00000331450 ASH1LQ9NR48 2969 aaKnown RBP13.87□□□□□ -0.19
LRRC28-202ENST00000331450 ALOX5APP20292 161 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 OTX1P32242 354 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-202ENST00000331450 MTNR1AP48039 350 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 NKX6-1P78426 367 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-202ENST00000331450 ZNF91Q05481 1191 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 POU4F2Q12837 409 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 EIF2B1Q14232 305 aaKnown RBP13.87□□□□□ -0.19
LRRC28-202ENST00000331450 RSPO1Q2MKA7 263 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-202ENST00000331450 SLC22A25Q6T423 547 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 TMEM200AQ86VY9 491 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 OR51G2Q8NGK0 314 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 OR1J2Q8NGS2 313 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 CNIH3Q8TBE1 160 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 SMAP2Q8WU79 429 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-202ENST00000331450 RNF133Q8WVZ7 376 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 NEUROG1Q92886 237 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 SLAMF6Q96DU3 332 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 Q96MT0 163 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 ANKRD60Q9BZ19 345 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 PLEKHF2Q9H8W4 249 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 CDH20Q9HBT6 801 aa13.87□□□□□ -0.19
LRRC28-202ENST00000331450 C5orf49A4QMS7 147 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 ZNF878C9JN71 531 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 LYNP07948 512 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 DBTP11182 482 aaKnown RBP13.86□□□□□ -0.19
LRRC28-202ENST00000331450 WNT5AP41221 380 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
LRRC28-202ENST00000331450 NUDT6P53370 316 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 ECH1Q13011 328 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 SNCBQ16143 134 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 SMN1Q16637 294 aaKnown RBP13.86□□□□□ -0.19
LRRC28-202ENST00000331450 ZNF672Q499Z4 452 aaPredicted RBP13.86□□□□□ -0.19
LRRC28-202ENST00000331450 LAIR2Q6ISS4 152 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 RHOUQ7L0Q8 258 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 RFLNBQ8N5W9 214 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 NUP37Q8NFH4 326 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 OR4F15Q8NGB8 312 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 SLC7A6Q92536 515 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 MNTQ99583 582 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
LRRC28-202ENST00000331450 SNTNA6NMZ2 147 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 E7EQL1 145 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 J3QRE1 110 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 HS3ST1O14792 307 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 APOL3O95236 402 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 DBHP09172 617 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 NR4A1P22736 598 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 MYF6P23409 242 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 PCSK6P29122 969 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 OPRL1P41146 370 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 HCCSP53701 268 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 KRTAP10-9P60411 292 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 CDK5R2Q13319 367 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 ZNF101Q8IZC7 436 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 AKAP1Q92667 903 aaKnown RBP eCLIP13.85□□□□□ -0.19
LRRC28-202ENST00000331450 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 DCLRE1CQ96SD1 692 aaKnown RBP13.85□□□□□ -0.19
LRRC28-202ENST00000331450 ZNF184Q99676 751 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-202ENST00000331450 MRPS18AQ9NVS2 196 aaKnown RBP13.85□□□□□ -0.19
LRRC28-202ENST00000331450 RAB26Q9ULW5 256 aa13.85□□□□□ -0.19
LRRC28-202ENST00000331450 EXOGQ9Y2C4 368 aaKnown RBP13.85□□□□□ -0.19
LRRC28-202ENST00000331450 TMEM14AQ9Y6G1 99 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms