RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 H2BFSP57053 126 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 DEFA5Q01523 94 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ACSM1Q08AH1 577 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 Q0VFX4 171 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CDK5R1Q15078 307 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 LIPNQ5VXI9 398 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ELP2Q6IA86 826 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SPINK14Q6IE38 97 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 OR7E24Q6IFN5 339 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 TMEM205Q6UW68 189 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 MAMDC2Q7Z304 686 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PXKQ7Z7A4 578 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 TMPRSS12Q86WS5 348 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 GLB1L2Q8IW92 636 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SPACA9Q96E40 222 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ADAT1Q9BUB4 502 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 EXOSC3Q9NQT5 275 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ZNF230Q9UIE0 474 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 LAMP5Q9UJQ1 280 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 FBXO4Q9UKT5 387 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 C9orf172C9J069 976 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PLPP3O14495 311 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ZNHIT1O43257 154 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 EIF4E2O60573 245 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 NMBP08949 121 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 IFI6P09912 130 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SRMP19623 302 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ACHEP22303 614 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PTGDSP41222 190 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 FOLR3P41439 243 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 EFNB2P52799 333 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ADAM8P78325 824 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SORDQ00796 357 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 MC2RQ01718 297 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 MFAP5Q13361 173 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 RAET1LQ5VY80 246 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 TMED4Q7Z7H5 227 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 GPALPP1Q8IXQ4 340 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 LILRB2Q8N423 598 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 OR2Y1Q8NGV0 311 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 NUBPLQ8TB37 319 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 RGP1Q92546 391 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 HGDQ93099 445 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 MARC2Q969Z3 335 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SLC25A28Q96A46 364 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 WBP1Q96G27 269 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 EDEM2Q9BV94 578 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 REG4Q9BYZ8 158 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 DIABLOQ9NR28 239 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 TCFL5Q9UL49 500 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PCDHGA9Q9Y5G4 932 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 WIF1Q9Y5W5 379 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CHCHD2Q9Y6H1 151 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 EML6Q6ZMW3 1958 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PHF3Q92576 2039 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SMG1Q96Q15 3661 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 MS4A18H0YCH9 400 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CCSO14618 274 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ARPC3O15145 178 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SC5DO75845 299 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 RLN2P04090 185 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 OR2T7P0C7T2 308 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PTBP1P26599 531 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 STARP49675 285 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 ISXQ2M1V0 245 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 MS4A18Q3C1V0 323 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PCGF3Q3KNV8 242 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 TMEM225Q6GV28 225 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 LIN54Q6MZP7 749 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 RPS19BP1Q86WX3 136 aaKnown RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 NAXDQ8IW45 347 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 OR4K17Q8NGC6 315 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 OR2T27Q8NH04 317 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 HAVCR2Q8TDQ0 301 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CT55Q8WUE5 264 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SMIM19Q96E16 107 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SLC19A3Q9BZV2 496 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SAV1Q9H4B6 383 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SEC61A2Q9H9S3 476 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CENPMQ9NSP4 180 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 C19orf25Q9UFG5 118 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-202ENST00000315962 IL17BQ9UHF5 180 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SLC22A13Q9Y226 551 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SPAARA0A1B0GVQ0 90 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 FAM74A7A6NL05 159 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 PDCD5O14737 125 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 TRAPPC6AO75865 159 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 KRT33AO76009 404 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 GLCEO94923 617 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 RFPL3SP0C7P2 107 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 NAGAP17050 411 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 NFYAP23511 347 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-202ENST00000315962 GBX2P52951 348 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-202ENST00000315962 BIDP55957 195 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 LGALS3BPQ08380 585 aa6.79□□□□□ -1.32
TRIM55-202ENST00000315962 SRSF6Q13247 344 aaKnown RBP6.79□□□□□ -1.32
TRIM55-202ENST00000315962 IL10RAQ13651 578 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms