RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RSBN1Q5VWQ0 802 aaPredicted RBP16.27■□□□□ 0.2
CCDC43-201ENST00000315286 KLHL24Q6TFL4 600 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 GGNQ86UU5 652 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 ZIC4Q8N9L1 334 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 OR13C3Q8NGS6 347 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 OR6N1Q8NGY5 312 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 KCNE4Q8WWG9 221 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 S100A16Q96FQ6 103 aaKnown RBP16.27■□□□□ 0.2
CCDC43-201ENST00000315286 TAS2R4Q9NYW5 299 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 FOXJ3Q9UPW0 622 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 ETV7Q9Y603 341 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 CACNG2Q9Y698 323 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 SMAD9O15198 467 aaKnown RBP16.26■□□□□ 0.19
CCDC43-201ENST00000315286 GSTZ1O43708 216 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-201ENST00000315286 LMX1BO60663 402 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 NEURL1O76050 574 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 WDPCPO95876 746 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 ITGA5P08648 1049 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 IGFBP3P17936 291 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-201ENST00000315286 DCTDP32321 178 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 STARP49675 285 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 RAC3P60763 192 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 ABHD17BQ5VST6 288 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 TMEM244Q5VVB8 128 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 PIP4P1Q86T03 277 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 RAB40AQ8WXH6 277 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 TMEM54Q969K7 222 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 UPRTQ96BW1 309 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 HAVCR1Q96D42 359 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 SFXN2Q96NB2 322 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 SIGLEC12Q96PQ1 595 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 ZFP64Q9NPA5 681 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 RER1O15258 196 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 CCNKO75909 580 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 TTRP02766 147 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 ACSM4P0C7M7 580 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 ITGA3P26006 1051 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 GDF1P27539 372 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 SLC6A1P30531 599 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 GABREP78334 506 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 LINGO2Q7L985 606 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 TMEM123Q8N131 208 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 TOMM5Q8N4H5 51 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 PLPP7Q8NBV4 271 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 GCDHQ92947 438 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-201ENST00000315286 NKX3-1Q99801 234 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-201ENST00000315286 AUNIPQ9H7T9 357 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 DDX28Q9NUL7 540 aaKnown RBP16.26■□□□□ 0.19
CCDC43-201ENST00000315286 CKLFQ9UBR5 152 aa16.26■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF878C9JN71 531 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 UBCP0CG48 685 aaKnown RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 TMIGD3P0DMS9 266 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 CFPP27918 469 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 PTH2RP49190 550 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 SELENOPP49908 381 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 SUCLG1P53597 346 aaKnown RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 CARD18P57730 90 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 CSRP2Q16527 193 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 SGCAQ16586 387 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 SIAH3Q8IW03 269 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 OR51D1Q8NGF3 324 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 SMIM4Q8WVI0 70 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF775Q96BV0 537 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 MARVELD1Q9BSK0 173 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 PBOV1Q9GZY1 135 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 RABL2AQ9UBK7 228 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 RABL2BQ9UNT1 228 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 MRPS18CQ9Y3D5 142 aaKnown RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 DNPH1O43598 174 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 NR2C1P13056 603 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 FSTP19883 344 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 CDK2P24941 298 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 BTCP35070 178 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 ELMOD2Q8IZ81 293 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 OR51A2Q8NGJ7 313 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 NKD1Q969G9 470 aa16.25■□□□□ 0.19
CCDC43-201ENST00000315286 PNRC2Q9NPJ4 139 aaKnown RBP16.25■□□□□ 0.19
CCDC43-201ENST00000315286 RTTNQ86VV8 2226 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 TTLL8A6PVC2 850 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 SLC17A2O00624 439 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 HSD11B1P28845 292 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 PRKXP51817 358 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF133P52736 654 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-201ENST00000315286 SCAND1P57086 179 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 TATDN3Q17R31 274 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 PLA1AQ53H76 456 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 TMEM69Q5SWH9 247 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 C10orf128Q5T292 105 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 FAM166AQ6J272 317 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 RHOUQ7L0Q8 258 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 GLRX5Q86SX6 157 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 IL22RA1Q8N6P7 574 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 OR6F1Q8NGZ6 308 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 UTP23Q9BRU9 249 aaKnown RBP16.24■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF416Q9BWM5 594 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 HES7Q9BYE0 225 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 OR2B2Q9GZK3 357 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 PLA2G3Q9NZ20 509 aa16.24■□□□□ 0.19
CCDC43-201ENST00000315286 BOKQ9UMX3 212 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-201ENST00000315286 CELSR3Q9NYQ7 3312 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms