RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ALG1L2C9J202 215 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 M0R233 179 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 SLC16A6O15403 523 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 SLC22A5O76082 557 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 PMP2P02689 132 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 ALPLP05186 524 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 RAB40ALP0C0E4 278 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 HACD4Q5VWC8 232 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 GDPGP1Q6ZNW5 385 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 RAB40AQ8WXH6 277 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 ANKRD9Q96BM1 317 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 RIMS4Q9H426 269 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 MT-ND4P03905 459 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 RAB11AP62491 216 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 PMPCAQ10713 525 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 DLEU7Q6UYE1 221 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 PIWIL3Q7Z3Z3 882 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 CEP290O15078 2479 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 ELFN2Q5R3F8 820 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 ADAMTS14Q8WXS8 1223 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 SHARPINQ9H0F6 387 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 NLKQ9UBE8 527 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 GLAP06280 429 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 TNFRSF1AP19438 455 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 MZB1Q8WU39 189 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 CCL17Q92583 94 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 C1QTNF3Q9BXJ4 246 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 GPR84Q9NQS5 396 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 TRIOBPQ9H2D6 2365 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 RPS25P62851 125 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 LSRQ86X29 649 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 FAM109AQ8N4B1 249 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 FOXB1Q99853 325 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 ACER3Q9NUN7 267 aa9.68□□□□□ -0.86
SYNPO2-201ENST00000307142 RP1L1Q8IWN7 2480 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 MEIKINA0A087WXM9 373 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 APEHP13798 732 aaKnown RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 AKR1C1Q04828 323 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 RHEBQ15382 184 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SHBQ15464 509 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SLC9A3R2Q15599 337 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 ACTBL2Q562R1 376 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 KIRREL2Q6UWL6 708 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 AMER3Q8N944 861 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 OR10K1Q8NGX5 313 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 CCDC32Q9BV29 185 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 OPA3Q9H6K4 179 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 TAS2R4Q9NYW5 299 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 CGGBP1Q9UFW8 167 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SRMP19623 302 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 GPM6AP51674 278 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 PLA2G7Q13093 441 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 HEPHL1Q6MZM0 1159 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SLC22A18ASQ8N1D0 253 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 MOB1AQ9H8S9 216 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 HSPB11Q9Y547 144 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 GAPDHSO14556 408 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SOD1P00441 154 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SNRPBP14678 240 aaKnown RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 HAAOP46952 286 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF117Q03924 483 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 OR2L13Q8N349 312 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 NECAP2Q9NVZ3 263 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 A0A087WUJ7 227 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 NDUFB3O43676 98 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SLC30A7Q8NEW0 376 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 TCTEX1D2Q8WW35 142 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 KTI12Q96EK9 354 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 KCNJ15Q99712 375 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 UCK1Q9HA47 277 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 CACNA1CQ13936 2221 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 NCBP2LA6PVI3 153 aaKnown RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SBK2P0C263 348 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SPINK2P20155 84 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 CD79BP40259 229 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 GSK3AP49840 483 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF136P52737 540 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 PDLIM3Q53GG5 364 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 GDPD1Q8N9F7 314 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SUCNR1Q9BXA5 334 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 TAS2R16Q9NYV7 291 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 TAAR3PQ9P1P4 343 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 GDF2Q9UK05 429 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SERTM1A2A2V5 107 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SPI1P17947 270 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 ANXA7P20073 488 aaKnown RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SRD5A2P31213 254 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF121P58317 390 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 RTL8BQ17RB0 113 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 WDSUB1Q8N9V3 476 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 TSSK2Q96PF2 358 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 NRTNQ99748 197 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 PPA2Q9H2U2 334 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
SYNPO2-201ENST00000307142 SC5DO75845 299 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms