RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FREM1Q5H8C1 2179 aa15.42■□□□□ 0.06
KRT28-201ENST00000306658 PIEZO2Q9H5I5 2752 aa15.42■□□□□ 0.06
KRT28-201ENST00000306658 LOC110117498-PIK3R3F6TDL0 507 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 CASKO14936 926 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 ARL6IP5O75915 188 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 PNPP00491 289 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 B4GALT1P15291 398 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 SDC2P34741 201 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 RORCP51449 518 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 MMP16P51512 607 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 PCBD1P61457 104 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 RPS11P62280 158 aaKnown RBP eCLIP15.41■□□□□ 0.06
KRT28-201ENST00000306658 GRB2P62993 217 aaKnown RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 HIST1H3AP68431 136 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 ZMAT1Q5H9K5 638 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 WDR38Q5JTN6 314 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 HIST2H3PS2Q5TEC6 136 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 NSUN5P2Q63ZY6 315 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 ZNF324BQ6AW86 544 aaPredicted RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 ZNF813Q6ZN06 617 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 HIST2H3AQ71DI3 136 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 FAM214BQ7L5A3 538 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 CATSPERDQ86XM0 798 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 TEX19Q8NA77 164 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 Q8NA96 180 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 DACH2Q96NX9 599 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 WACQ9BTA9 647 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 TPK1Q9H3S4 243 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 C12orf49Q9H741 205 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 SNTG1Q9NSN8 517 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 FBXL3Q9UKT7 428 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 EMC9Q9Y3B6 208 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 A3GALT2U3KPV4 340 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 SRSF10O75494 262 aaKnown RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 CALRP27797 417 aaKnown RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 PTGER4P35408 488 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 MXD1Q05195 221 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 ZNF404Q494X3 552 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 LINC00299Q6ZSB3 139 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 FGD2Q7Z6J4 655 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 SYT9Q86SS6 491 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 CISD2Q8N5K1 135 aaKnown RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 OR13C5Q8NGS8 318 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 MCFD2Q8NI22 146 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 FBXO17Q96EF6 278 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 SH3GL3Q99963 347 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 MMP27Q9H306 513 aa15.41■□□□□ 0.06
KRT28-201ENST00000306658 PNRC2Q9NPJ4 139 aaKnown RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 DDX28Q9NUL7 540 aaKnown RBP15.41■□□□□ 0.06
KRT28-201ENST00000306658 CHD8Q9HCK8 2581 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 ARPC4-TTLL3A0A0A6YYG9 625 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 ZNF879B4DU55 563 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 WDR1O75083 606 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 MYL9P24844 172 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 MAPK3P27361 379 aaPredicted RBP15.4■□□□□ 0.06
KRT28-201ENST00000306658 KIR3DL2P43630 455 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 OR3A2P47893 321 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 MTNR1BP49286 362 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 ARF1P84077 181 aaKnown RBP15.4■□□□□ 0.06
KRT28-201ENST00000306658 MFGE8Q08431 387 aaPredicted RBP15.4■□□□□ 0.06
KRT28-201ENST00000306658 SCRN3Q0VDG4 424 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 FAPQ12884 760 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 ELFN2Q5R3F8 820 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 FBXW9Q5XUX1 488 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 UNQ9370/PRO34162Q6UXP9 181 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 ZNF627Q7L945 461 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 SLC16A14Q7RTX9 510 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 IL17RDQ8NFM7 739 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 GPR148Q8TDV2 347 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 THRSPQ92748 146 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 SLC25A46Q96AG3 418 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 OR14A2Q96R54 314 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 ATF6BQ99941 703 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 OR52A1Q9UKL2 312 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 PMF1-BGLAPU3KQ54 211 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 BOD1L1Q8NFC6 3051 aa15.4■□□□□ 0.06
KRT28-201ENST00000306658 TMEM8BA6NDV4 472 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 FIGNL2A6NMB9 653 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 TPOP07202 933 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 Q499Y3 187 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 ZNF704Q6ZNC4 412 aaPredicted RBP15.39■□□□□ 0.05
KRT28-201ENST00000306658 TPRA1Q86W33 373 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 GCNT2Q8N0V5 402 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 TBC1D15Q8TC07 691 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 MOB1AQ9H8S9 216 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 PLEK2Q9NYT0 353 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 MALT1Q9UDY8 824 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 SLC22A13Q9Y226 551 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 SLC5A6Q9Y289 635 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 TIMM10BQ9Y5J6 103 aa15.39■□□□□ 0.05
KRT28-201ENST00000306658 DVL2O14641 736 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 SGCEO43556 437 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 APOC1P02654 83 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 HOXD4P09016 255 aaPredicted RBP15.38■□□□□ 0.05
KRT28-201ENST00000306658 UCHL1P09936 223 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 OCM2P0CE71 109 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 PAX7P23759 505 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 CTSSP25774 331 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 PSMA6P60900 246 aaKnown RBP15.38■□□□□ 0.05
KRT28-201ENST00000306658 GUSBP1Q15486 140 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms