RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 A0A1B0GUH1 482 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 TBX19O60806 448 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 CNOT4O95628 575 aaKnown RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 FCGR2AP12318 317 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 ZNF74Q16587 644 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 NPEPL1Q8NDH3 523 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 OR4D6Q8NGJ1 314 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 CCDC74AQ96AQ1 378 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 TRAF4Q9BUZ4 470 aaPredicted RBP12.03□□□□□ -0.48
CASC4-201ENST00000299957 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 PTTG3PQ9NZH4 202 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 IGHV5-51A0A0C4DH38 117 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 NKX2-2O95096 273 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 CLDN17P56750 224 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 DCAF12L2Q5VW00 463 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 BRICD5Q6PL45 260 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 SCMH1Q96GD3 660 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 AMELYQ99218 206 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 SLC5A6Q9Y289 635 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 HIF3AQ9Y2N7 669 aa12.03□□□□□ -0.48
CASC4-201ENST00000299957 A0A087WV62 115 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 ALOX12BO75342 701 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.48
CASC4-201ENST00000299957 TPT1P13693 172 aaKnown RBP12.02□□□□□ -0.48
CASC4-201ENST00000299957 SLC6A8P48029 635 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 RPS15P62841 145 aaKnown RBP12.02□□□□□ -0.48
CASC4-201ENST00000299957 CLINT1Q14677 625 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 CLEC9AQ6UXN8 241 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 FBXW5Q969U6 566 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 PELOQ9BRX2 385 aaKnown RBP12.02□□□□□ -0.48
CASC4-201ENST00000299957 RSPO3Q9BXY4 272 aaPredicted RBP12.02□□□□□ -0.48
CASC4-201ENST00000299957 SCML1Q9UN30 329 aa12.02□□□□□ -0.48
CASC4-201ENST00000299957 D6RAR5 112 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 EDN3P14138 238 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 SLC17A1Q14916 467 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 TMEM255AQ5JRV8 349 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 BEND4Q6ZU67 534 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 MCEMP1Q8IX19 187 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 OR1J4Q8NGS1 313 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 JAM3Q9BX67 310 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 CTSFQ9UBX1 484 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 F12P00748 615 aaPredicted RBP12.02□□□□□ -0.49
CASC4-201ENST00000299957 ASCL1P50553 236 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 ATP1B3P54709 279 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 EIF5AP63241 154 aaKnown RBP12.02□□□□□ -0.49
CASC4-201ENST00000299957 HTRA4P83105 476 aaPredicted RBP12.02□□□□□ -0.49
CASC4-201ENST00000299957 DLX2Q07687 328 aaPredicted RBP12.02□□□□□ -0.49
CASC4-201ENST00000299957 PLA2G7Q13093 441 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 CCINQ13939 588 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 ADGRE4PQ86SQ3 457 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 GALNT16Q8N428 558 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 FAM71CQ8NEG0 241 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 C1orf198Q9H425 327 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 A0A0G2JMZ2 1700 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 LRRC37A2A6NM11 1700 aa12.02□□□□□ -0.49
CASC4-201ENST00000299957 PRSS37A4D1T9 235 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 STMND1H3BQB6 276 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 OR7C1O76099 320 aaPredicted RBP12.01□□□□□ -0.49
CASC4-201ENST00000299957 LDOC1O95751 146 aaPredicted RBP12.01□□□□□ -0.49
CASC4-201ENST00000299957 ADH6P28332 368 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 OTX2P32243 289 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 CD80P33681 288 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 GLP1RP43220 463 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 IAH1Q2TAA2 248 aaPredicted RBP12.01□□□□□ -0.49
CASC4-201ENST00000299957 THRSPQ92748 146 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 SGCZQ96LD1 299 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 UBE2J1Q9Y385 318 aaPredicted RBP12.01□□□□□ -0.49
CASC4-201ENST00000299957 ADAM11O75078 769 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 MPC2O95563 127 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 GUSBP08236 651 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 FAM122CQ6P4D5 195 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 PRSS42Q7Z5A4 293 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 ANKRD9Q96BM1 317 aaPredicted RBP12.01□□□□□ -0.49
CASC4-201ENST00000299957 DDIT4LQ96D03 193 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 NUDT9Q9BW91 350 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 FAM96BQ9Y3D0 163 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 PUS1Q9Y606 427 aaKnown RBP eCLIP12.01□□□□□ -0.49
CASC4-201ENST00000299957 TEX51A0A1B0GUA7 166 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 A8MVM7 634 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 ZNHIT1O43257 154 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 GLSO94925 669 aaPredicted RBP12.01□□□□□ -0.49
CASC4-201ENST00000299957 NDUFB6O95139 128 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 GABRG2P18507 467 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 ENPP1P22413 925 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 LAMTOR1Q6IAA8 161 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 SULF2Q8IWU5 870 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 OR11G2Q8NGC1 345 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 STK35Q8TDR2 534 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 IL1F10Q8WWZ1 152 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 SLC46A1Q96NT5 459 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 TSPAN32Q96QS1 320 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 LRP12Q9Y561 859 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms