RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 ZNF565Q8N9K5 539 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 ANGPTL4Q9BY76 406 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 TAS2R8Q9NYW2 309 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 TAS2R4Q9NYW5 299 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 EXOGQ9Y2C4 368 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 IGLV3-12A0A075B6K2 115 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 EPPINO95925 133 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 TGM4P49221 684 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 SMCO1Q147U7 214 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 NKPD1Q17RQ9 610 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 TMEM81Q6P7N7 255 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 TRILQ7L0X0 811 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 RAB40AQ8WXH6 277 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 ZC3HAV1LQ96H79 300 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 C5orf49A4QMS7 147 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 RER1O15258 196 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 SCGNO76038 276 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 AMY2AP04746 511 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 CTF1Q16619 201 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 OLFML2AQ68BL7 652 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 TIPARPQ7Z3E1 657 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 DYNC2LI1Q8TCX1 351 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 ADAM19Q9H013 955 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 NOP16Q9Y3C1 178 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 LRP12Q9Y561 859 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 PCMT1P22061 227 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 BCAP31P51572 246 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 GFRALQ6UXV0 394 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 DOK3Q7L591 496 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 PBOV1Q9GZY1 135 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 TP63Q9H3D4 680 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 CD53P19397 219 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 ARL6IP1Q15041 203 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 SLC22A24Q8N4F4 322 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 C14orf166Q9Y224 244 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 MRPS28Q9Y2Q9 187 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 LRP3O75074 770 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 RAF1P04049 648 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 PRKACBP22694 351 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 PTH2RP49190 550 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 AGFG1P52594 562 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 NUBP1P53384 320 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 GPR155Q7Z3F1 870 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 FAM109AQ8N4B1 249 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 PAQR8Q8TEZ7 354 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 ASB10Q8WXI3 467 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 FAM3DQ96BQ1 224 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 TRGV8A0A0C4DH27 118 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 A0A1B0GTH9 108 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 PMS2P1A4D2B8 440 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 C9orf172C9J069 976 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 CEACAM1P13688 526 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 IRF2P14316 349 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 IL11P20809 199 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 VEGFCP49767 419 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 OR10A3P58181 314 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 ZNF121P58317 390 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 DMRTC1Q5HYR2 192 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 ELFN2Q5R3F8 820 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 SEMA6DQ8NFY4 1073 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 OR6X1Q8NH79 312 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 ST6GALNAC5Q9BVH7 336 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 NELFAQ9H3P2 528 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
PDLIM2-201ENST00000265810 KIF26AQ9ULI4 1882 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 MDC1Q14676 2089 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 CLDN20P56880 219 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 INSL4Q14641 139 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 RNPS1Q15287 305 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 UBE2NLQ5JXB2 153 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 MICU1Q9BPX6 476 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 OR10A4Q9H209 315 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 H2AFB2P0C5Z0 115 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 KANSL1Q7Z3B3 1105 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 ANGPTL5Q86XS5 388 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 FAM71CQ8NEG0 241 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 TMEM59Q9BXS4 323 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 TTTY12Q9BZ98 90 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 A0A0J9YW62 118 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 E9PI62 339 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 WRBO00258 174 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 TIMM8AO60220 97 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 WNT11O96014 354 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 UMODP07911 640 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 IL7P13232 177 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 SSX1Q16384 188 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 CDCP2Q5VXM1 449 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 KCTD9Q7L273 389 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 CSNK2A3Q8NEV1 391 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 METTL9Q9H1A3 318 aa12.92□□□□□ -0.34
PDLIM2-201ENST00000265810 MOB1AQ9H8S9 216 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms