RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 KHDRBS3O75525 346 aaKnown RBP16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 CD55P08174 381 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 RHCEP18577 417 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 GSTM3P21266 225 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 LCN2P80188 198 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 CDK5R2Q13319 367 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 ZMAT1Q5H9K5 638 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 DCAF12L2Q5VW00 463 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 Q6ZR03 302 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 GLB1L2Q8IW92 636 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 SEMA6DQ8NFY4 1073 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 OR2Z1Q8NG97 314 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 OR4M2Q8NGB6 313 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 CMTM5Q96DZ9 223 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 TSSK2Q96PF2 358 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 DIRC2Q96SL1 478 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 WACQ9BTA9 647 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 NUAK2Q9H093 628 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 FAM107BQ9H098 131 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 DCAF13Q9NV06 445 aaKnown RBP16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 AURKCQ9UQB9 309 aa16.08■□□□□ 0.16
TM6SF1-201ENST00000258909 UNC119BA6NIH7 251 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 DBHP09172 617 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 SBK2P0C263 348 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 EPHA1P21709 976 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 CDKN2AP42771 156 aaKnown RBP16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 CENPAP49450 140 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 SLC3A1Q07837 685 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 AQP6Q13520 282 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 CCDC92Q53HC0 331 aaPredicted RBP16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 GPR139Q6DWJ6 353 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 PEG10Q86TG7 708 aaKnown RBP16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 NPEPL1Q8NDH3 523 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 SPAG4Q9NPE6 437 aa16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 VSX1Q9NZR4 365 aaPredicted RBP16.07■□□□□ 0.16
TM6SF1-201ENST00000258909 RER1O15258 196 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 PPP1R3DO95685 299 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 MEP1BQ16820 701 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 ZER1Q7Z7L7 766 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 OR5AS1Q8N127 324 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 OR1F12Q8NHA8 337 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 ZNF418Q8TF45 676 aaPredicted RBP16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 GPX7Q96SL4 187 aaPredicted RBP16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 C7orf69Q9H7B7 122 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 PCDHB10Q9UN67 800 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 NPTNQ9Y639 398 aa16.06■□□□□ 0.16
TM6SF1-201ENST00000258909 A0A0A6YYJ9 748 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 OR6C6A6NF89 314 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 DCTN6O00399 190 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 KITLGP21583 273 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 ZFP36P26651 326 aaKnown RBP16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 MSX2P35548 267 aaPredicted RBP16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 LSM6P62312 80 aaKnown RBP16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 SCGB2A2Q13296 93 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 HLXQ14774 488 aaPredicted RBP16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 KRT72Q14CN4 511 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 DPY19L2P2Q6ZN68 376 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 ITLN1Q8WWA0 313 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 HAVCR1Q96D42 359 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 FUZQ9BT04 418 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 TMEM106BQ9NUM4 274 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 PTTG3PQ9NZH4 202 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 POLR1DQ9Y2S0 133 aa16.05■□□□□ 0.16
TM6SF1-201ENST00000258909 GMNNO75496 209 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 IGHV2-70P01814 119 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 TNFSF4P23510 183 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 RPS6KA3P51812 740 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 CORO6Q6QEF8 472 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 SMARCD3Q6STE5 483 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 C1QL2Q7Z5L3 287 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 ADCK1Q86TW2 530 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 ST7LQ8TDW4 575 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 PTP4A1Q93096 173 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 DHRS1Q96LJ7 313 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 ERMAPQ96PL5 475 aaPredicted RBP16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 SRA1Q9HD15 236 aaKnown RBP16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 OPN4Q9UHM6 478 aa16.04■□□□□ 0.16
TM6SF1-201ENST00000258909 J3QLI3 93 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 TXNDC12O95881 172 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 C12orf54Q6X4T0 127 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 C22orf15Q8WYQ4 148 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 PYURFQ96I23 114 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 SAMD8Q96LT4 415 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 OR2V2Q96R30 315 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 SLC6A7Q99884 636 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 KRCC1Q9NPI7 259 aaPredicted RBP16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 LHFPL6Q9Y693 200 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 GADD45GO95257 159 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 TNFRSF1AP19438 455 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 TUBG1P23258 451 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 PRDX6P30041 224 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 HILS1P60008 231 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 SEC61A1P61619 476 aaKnown RBP16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 SPIBQ01892 262 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 KCNMB1Q16558 191 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 OR2T2Q6IF00 324 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 LEG1Q6P5S2 330 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 TEX29Q8N6K0 151 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 ATG16L2Q8NAA4 619 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms