RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TPRA1Q86W33 373 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 UBE2J2Q8N2K1 259 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 PRSS35Q8N3Z0 413 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 OR6Q1Q8NGQ2 317 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 GPR148Q8TDV2 347 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 THRSPQ92748 146 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF837Q96EG3 531 aaPredicted RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 NXF2Q9GZY0 626 aaKnown RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 TMEM38BQ9NVV0 291 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 FBXL3Q9UKT7 428 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 LHX6Q9UPM6 363 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 PEX16Q9Y5Y5 336 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 A0A075B6Q4 140 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF587BE7ETH6 402 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 FARS2O95363 451 aaKnown RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 IGHV3-9P01782 118 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 GRB2P62993 217 aaKnown RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 ENDOGQ14249 297 aaKnown RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 SF3B4Q15427 424 aaKnown RBP eCLIP16.5■□□□□ 0.239e-9■■■□□ 19
TNFSF9-201ENST00000245817 Q499Y3 187 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 HSD17B12Q53GQ0 312 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 FAM180AQ6UWF9 173 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 ABHD12BQ7Z5M8 362 aaPredicted RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 CATSPERDQ86XM0 798 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 OR5M9Q8NGP3 310 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 GMPPAQ96IJ6 420 aaPredicted RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 HMG20AQ9NP66 347 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 OR52A1Q9UKL2 312 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF407Q9C0G0 2248 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 A0A1W2PPK0 400 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 AHRRA9YTQ3 701 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 DVL2O14641 736 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 PNPP00491 289 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 CST2P09228 141 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 UCHL1P09936 223 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 KIR3DL2P43630 455 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 BMXP51813 675 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 MFGE8Q08431 387 aaPredicted RBP16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 STK11Q15831 433 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 FAM27D1Q5T7N8 215 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 BCL2L15Q5TBC7 163 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 UNQ9370/PRO34162Q6UXP9 181 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 CEP19Q96LK0 163 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 BARHL1Q9BZE3 327 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 SLC7A10Q9NS82 523 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 SLC22A13Q9Y226 551 aa16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 TNRC6AQ8NDV7 1962 aaKnown RBP16.49■□□□□ 0.23
TNFSF9-201ENST00000245817 TRAV1-2A0A0B4J238 106 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 SMIM30A4D0T7 59 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 B4GALT1P15291 398 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 MMP16P51512 607 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 PCBD1P61457 104 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF704Q6ZNC4 412 aaPredicted RBP16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 LINGO2Q7L985 606 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 CROCCP3Q8IVE0 287 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 OR10S1Q8NGN2 331 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 TSEN15Q8WW01 171 aaKnown RBP16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 SLITRK2Q9H156 845 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 NOX4Q9NPH5 578 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 BRD7Q9NPI1 651 aa16.48■□□□□ 0.23
TNFSF9-201ENST00000245817 DNAJC13O75165 2243 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 MGAQ8IWI9 3026 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 ARPC4-TTLL3A0A0A6YYG9 625 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 CLDN25C9JDP6 229 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 RGS5O15539 181 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 WISP2O76076 250 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 AGTR1P30556 359 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 SCRN3Q0VDG4 424 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF846Q147U1 533 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 NRN1LQ496H8 165 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 KRTCAP3Q53RY4 240 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF813Q6ZN06 617 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 SLC16A14Q7RTX9 510 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 NUFIP2Q7Z417 695 aaKnown RBP16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 ADGRE4PQ86SQ3 457 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 LUZP2Q86TE4 346 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 RDH10Q8IZV5 341 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 SLC22A24Q8N4F4 322 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 ATF6BQ99941 703 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 SH3GL3Q99963 347 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 WDR12Q9GZL7 423 aaKnown RBP16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 PPIL3Q9H2H8 161 aaKnown RBP16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 MOB1AQ9H8S9 216 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 PLEK2Q9NYT0 353 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 LUZP4Q9P127 313 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 CLCF1Q9UBD9 225 aa16.47■□□□□ 0.23
TNFSF9-201ENST00000245817 IQCMA0A1B0GVH7 501 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 ACOD1A6NK06 481 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 RPL36A-HNRNPH2H7BZ11 118 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 PDCD5O14737 125 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 SRSF10O75494 262 aaKnown RBP16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 SRMP19623 302 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 RAB3BP20337 219 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 CFL1P23528 166 aaKnown RBP16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 SOX2P48431 317 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 ST3GAL2Q16842 350 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 ELFN2Q5R3F8 820 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 TMEM244Q5VVB8 128 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF585AQ6P3V2 769 aa16.46■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF283Q8N7M2 679 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms