RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SYS1Q8N2H4 156 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 OR52N1Q8NH53 320 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 NANOS1Q8WY41 292 aaKnown RBP12.24□□□□□ -0.45
SEC61B-201ENST00000223641 S100PBPQ96BU1 408 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 SLAMF6Q96DU3 332 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 ALG8Q9BVK2 526 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 OR2H1Q9GZK4 316 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 WNT5BQ9H1J7 359 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 CRNNQ9UBG3 495 aaPredicted RBP12.24□□□□□ -0.45
SEC61B-201ENST00000223641 MRM2Q9UI43 246 aaKnown RBP12.24□□□□□ -0.45
SEC61B-201ENST00000223641 ATPIF1Q9UII2 106 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 AMDHD2Q9Y303 409 aa12.24□□□□□ -0.45
SEC61B-201ENST00000223641 LSM2Q9Y333 95 aaKnown RBP12.24□□□□□ -0.45
SEC61B-201ENST00000223641 NKX2-6A6NCS4 301 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 OR6C6A6NF89 314 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 FAM90A27PA6NNH2 459 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ZNF878C9JN71 531 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 SGCEO43556 437 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ZNF254O75437 659 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 COX5BP10606 129 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 CBR1P16152 277 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 DCTDP32321 178 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ACTA2P62736 377 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ACTG2P63267 376 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 TUBA4AP68366 448 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 SORDQ00796 357 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 SRSF1Q07955 248 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 RAB35Q15286 201 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 GSG1Q2KHT4 349 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 TMEM53Q6P2H8 277 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 SEZ6L2Q6UXD5 910 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 C22orf34Q6ZV56 151 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 VASH1Q7L8A9 365 aaPredicted RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 SSX8Q7RTT4 187 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 MDP1Q86V88 176 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ZNF584Q8IVC4 421 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 MYCBPQ99417 103 aaPredicted RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 COQ7Q99807 217 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ACTR6Q9GZN1 396 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 CCDC90BQ9GZT6 254 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 HDHD2Q9H0R4 259 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 MOV10Q9HCE1 1003 aaKnown RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ACOT13Q9NPJ3 140 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 CHCHD3Q9NX63 227 aaKnown RBP12.23□□□□□ -0.45
SEC61B-201ENST00000223641 SLCO1C1Q9NYB5 712 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 PLEK2Q9NYT0 353 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 ERGIC3Q9Y282 383 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 CACNA1CQ13936 2221 aa12.23□□□□□ -0.45
SEC61B-201ENST00000223641 CLEC18AA5D8T8 446 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 METTL15A6NJ78 407 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 MAGEB4O15481 346 aaPredicted RBP12.22□□□□□ -0.45
SEC61B-201ENST00000223641 PTHP01270 115 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 IGLV1-44P01699 117 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 SERPINA5P05154 406 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 CD79AP11912 226 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 PLA2G2AP14555 144 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 PPP3CBP16298 524 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ZNF14P17017 642 aaPredicted RBP12.22□□□□□ -0.45
SEC61B-201ENST00000223641 CRYGSP22914 178 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 HOXC12P31275 282 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 OR12D2P58182 307 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 TUBA1BP68363 451 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ACSM1Q08AH1 577 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ECH1Q13011 328 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 DOC2BQ14184 412 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 TAB1Q15750 504 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 C3orf36Q3SXR2 165 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 OR2G6Q5TZ20 316 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 XAF1Q6GPH4 301 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ZNF774Q6NX45 483 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 CLEC18BQ6UXF7 455 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ALDH16A1Q8IZ83 802 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 KLHL36Q8N4N3 616 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 SVOPQ8N4V2 548 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 CLEC18CQ8NCF0 446 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 AKR7LQ8NHP1 331 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 SNX33Q8WV41 574 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 LRRC46Q96FV0 321 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 MRPL48Q96GC5 212 aaKnown RBP12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ATF6BQ99941 703 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 MROQ9BYG7 248 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 RNF121Q9H920 327 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
SEC61B-201ENST00000223641 SNX5Q9Y5X3 404 aa12.22□□□□□ -0.45
SEC61B-201ENST00000223641 FLNCQ14315 2725 aa12.21□□□□□ -0.45
SEC61B-201ENST00000223641 A0A1W2PR80 420 aa12.21□□□□□ -0.45
SEC61B-201ENST00000223641 PSMD9O00233 223 aa12.21□□□□□ -0.45
SEC61B-201ENST00000223641 DOK2O60496 412 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms