RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Klf5Q9Z0Z7 446 aaKnown RBP20.31■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Padi1Q9Z185 662 aa20.31■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Pkd1l3Q2EG98 2201 aa20.31■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cd101A8E0Y8 1033 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Tex28B1AYN9 409 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr543E9PWI5 336 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Csf1P07141 552 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Tcea1P10711 301 aaKnown RBP20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cma1P21844 247 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cnr1P47746 473 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 RidaP52760 135 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Tmem14aP56983 99 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Lingo2Q3URE9 606 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Pcyt1bQ811Q9 369 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Slc30a8Q8BGG0 367 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Nudt9Q8BVU5 350 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Elfn1Q8C8T7 828 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Q8CDS7 251 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Sav1Q8VEB2 386 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr164Q8VF87 315 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 CytipQ91VY6 359 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Prss28Q924N9 274 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Hspb2Q99PR8 182 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Coq5Q9CXI0 327 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Mrto4Q9D0I8 239 aaKnown RBP20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 1700034I23RikQ9D9Q3 184 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Ssr3Q9DCF9 185 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Acss2Q9QXG4 701 aa20.3■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Prr32A2AFE9 284 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Gm13078A2AGW8 474 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Lao1B1ARV3 523 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Muc3E9PWP7 378 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 9330182O14RikJ3QNB2 140 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Gm8660K7N6J2 305 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Ntn1O09118 604 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 CaskO70589 926 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Nme1P15532 152 aaKnown RBP20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Art5P70352 309 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Thbs2Q03350 1172 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 MestQ07646 335 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr145Q60882 310 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Abhd17bQ7M759 288 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 AntxrlQ8BVM2 641 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Vmn1r17Q8R2D8 303 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr215Q8VF82 310 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr444Q8VFS6 310 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr1443Q8VFW8 312 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Ranbp3Q9CT10 491 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 CsQ9CZU6 464 aaKnown RBP20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Ighv1-54A0A075B5W5 117 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Gm28576A0A087WRP6 222 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr655E9Q252 308 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cyp2j8G3UZ38 503 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 PrkcaP20444 672 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Bcl2l15Q08ED0 167 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Jsrp1Q3MI48 332 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Vmn1r11Q3SXA2 299 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Zp3rQ60736 579 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Acvr1bQ61271 505 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 SordQ64442 357 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Zfp748Q7TPL6 888 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Mettl21eQ8CDZ2 244 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 PhyhipQ8K0S0 330 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr788Q8VFI0 311 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Tstd3Q9D0B5 157 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 TrirQ9D735 173 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 H2afb1S4R1E0 115 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 H2afb3S4R1G7 115 aa20.29■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Zfp735B1ARH2 734 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Gsg1lD3Z7H4 322 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Rasd1O35626 280 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Drd4P51436 387 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Crabp1P62965 137 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Arhgef9Q3UTH8 516 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Fzd8Q61091 685 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 TecrlQ8BFZ1 361 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr1395Q8VGD7 317 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cdk20Q9JHU3 346 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Slc7a11Q9WTR6 502 aa20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Usp24B1AY13 2617 aaKnown RBP20.28■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Trbv12-1A0A0B4J1H0 124 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr1223A0A1L1SU13 311 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Klhl15A2AAX3 604 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Fam53aE9PV82 402 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Olfr172E9Q8F6 309 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Gm5916G5E8W5 102 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Slc30a2Q2HJ10 371 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Zdhhc8Q5Y5T5 762 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 ShhQ62226 437 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cfap161Q6P8Y0 303 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Slc6a7Q6PGE7 637 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Hsh2dQ6VYH9 334 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Gper1Q8BMP4 375 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Ccm2lQ8VCC6 481 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cacng6Q8VHW3 260 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Vmn1r43Q8VIC9 329 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Cdc42ep3Q9CQC5 254 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Pfn4Q9D6I3 129 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Med11Q9D8C6 117 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 PacrgQ9DAK2 241 aa20.27■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms