RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 UGT2A1Q9Y4X1 527 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ITPR2Q14571 2701 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 CCDC182A6NF36 153 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 SGCEO43556 437 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 APOL3O95236 402 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 MPZL1O95297 269 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 HLA-HP01893 362 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 APOC1P02654 83 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 KRT8P05787 483 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 H2BFMP0C1H6 154 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 SBK2P0C263 348 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 OR2T7P0C7T2 308 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 GABRB1P18505 474 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 DCKP27707 260 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 HTR5AP47898 357 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 RAB1AP62820 205 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 GALK2Q01415 458 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 PIGFQ07326 219 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 FBXL19-AS1Q494R0 122 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 B3GLCTQ6Y288 498 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 TMPRSS11AQ6ZMR5 421 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 FOXL2NBQ6ZUU3 175 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 DPY19L4Q7Z388 723 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 DCXRQ7Z4W1 244 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 KRT77Q7Z794 578 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 WFDC8Q8IUA0 241 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 OR2T27Q8NH04 317 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 APH1BQ8WW43 257 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-218ENST00000641491 SPTSSAQ969W0 71 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF837Q96EG3 531 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-218ENST00000641491 DDOQ99489 341 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 MROQ9BYG7 248 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 HDHD2Q9H0R4 259 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 CENPMQ9NSP4 180 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 GDF2Q9UK05 429 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-218ENST00000641491 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
PHGDH-218ENST00000641491 LRRC42Q9Y546 428 aa11.35□□□□□ -0.59
PHGDH-218ENST00000641491 ARPC4-TTLL3A0A0A6YYG9 625 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF878C9JN71 531 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 PRSS44E7EML9 344 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 E9PQ18 207 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 M0R1B8 84 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 RGS10O43665 173 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 XPNPEP2O43895 674 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 TFP02787 698 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 TACSTD2P09758 323 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 PIPP12273 146 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF32P17041 273 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 CCNOP22674 350 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 GDI2P50395 445 aaKnown RBP11.34□□□□□ -0.59
PHGDH-218ENST00000641491 CHN2P52757 468 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 GRB2P62993 217 aaKnown RBP11.34□□□□□ -0.59
PHGDH-218ENST00000641491 TUBA1BP68363 451 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 TUBA4AP68366 448 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 EFNB1P98172 346 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ECH1Q13011 328 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 RAB35Q15286 201 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 KCNMB1Q16558 191 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 SMN1Q16637 294 aaKnown RBP11.34□□□□□ -0.59
PHGDH-218ENST00000641491 TUBA1AQ71U36 451 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF627Q7L945 461 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 SKA3Q8IX90 412 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ACBD7Q8N6N7 88 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 OTOSQ8NHW6 89 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 HTRA1Q92743 480 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 NABP1Q96AH0 204 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 SP140LQ9H930 580 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 CDH20Q9HBT6 801 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ADGRL4Q9HBW9 690 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 PLCXD1Q9NUJ7 323 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 EIF3KQ9UBQ5 218 aaKnown RBP11.34□□□□□ -0.59
PHGDH-218ENST00000641491 GTF2A1LQ9UNN4 478 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 SPEF1Q9Y4P9 236 aa11.34□□□□□ -0.59
PHGDH-218ENST00000641491 ESPL1Q14674 2120 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 A0A1W2PR80 420 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 OR6C6A6NF89 314 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 WBP4O75554 376 aaKnown RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 KIR2DL3P43628 341 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 SLC6A9P48067 706 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 RIDAP52758 137 aaKnown RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 GABARAPL2P60520 117 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ST3GAL4Q11206 333 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF829Q3KNS6 432 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 TEX30Q5JUR7 227 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ELFN2Q5R3F8 820 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF322Q6U7Q0 402 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 UGT2A3Q6UWM9 527 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 LYPD4Q6UWN0 246 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 TMEM108Q6UXF1 575 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 PLEKHG7Q6ZR37 379 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 SPATC1Q76KD6 591 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms