RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 IPCEF1Q8WWN9 437 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-232ENST00000640653 RERGLQ9H628 205 aa21.51■■□□□ 1.03
VEGFA-232ENST00000640653 PLSCR5A0PG75 271 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 SGCEO43556 437 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 RP2O75695 350 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 TXNDC12O95881 172 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 IFNGR2P38484 337 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 MPV17P39210 176 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 HTR5AP47898 357 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 MNAT1P51948 309 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 FXYD6P3P58550 94 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 AQP6Q13520 282 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 CR1LQ2VPA4 569 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 IL17RELQ6ZVW7 336 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 CLDND2Q8NHS1 167 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 FANK1Q8TC84 345 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 SAP30LQ9HAJ7 183 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 CYSLTR2Q9NS75 346 aa21.5■■□□□ 1.03
VEGFA-232ENST00000640653 CGGBP1Q9UFW8 167 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-232ENST00000640653 CDC14BO60729 498 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 ABHD16AO95870 558 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 TFP02787 698 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 LIPAP38571 399 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 CRYBB2P43320 205 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 LSM6P62312 80 aaKnown RBP21.49■■□□□ 1.03
VEGFA-232ENST00000640653 FAM209AQ5JX71 171 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 DNM1P34Q6PK57 102 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 ZER1Q7Z7L7 766 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 GTF3AQ92664 365 aaKnown RBP21.49■■□□□ 1.03
VEGFA-232ENST00000640653 GPA33Q99795 319 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 RACGAP1Q9H0H5 632 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 NARFLQ9H6Q4 476 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 IL1RAPQ9NPH3 570 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 TMCC3Q9ULS5 477 aa21.49■■□□□ 1.03
VEGFA-232ENST00000640653 COA3Q9Y2R0 106 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-232ENST00000640653 IGHV1-69-2A0A0G2JMI3 117 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 RNF212BA8MTL3 300 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 B4DSR2 109 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 OR10H3O60404 316 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 NGFP01138 241 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 PCMT1P22061 227 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 SLC6A6P31641 620 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 THBS2P35442 1172 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 MMP15P51511 669 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 TSTQ16762 297 aaKnown RBP21.48■■□□□ 1.03
VEGFA-232ENST00000640653 RFX4Q33E94 735 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 PTCHD4Q6ZW05 846 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 NPEPL1Q8NDH3 523 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 SPATA3Q8NHX4 192 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 ERMAPQ96PL5 475 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-232ENST00000640653 NUAK2Q9H093 628 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 TBCCD1Q9NVR7 557 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 PLEK2Q9NYT0 353 aa21.48■■□□□ 1.03
VEGFA-232ENST00000640653 MALRD1Q5VYJ5 2156 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 DNHD1Q96M86 4753 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 IMPA2O14732 288 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 SPRY3O43610 288 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 PPP1R3DO95685 299 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 GSTM3P21266 225 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 TUBG1P23258 451 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 FPR3P25089 353 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 CRABP1P29762 137 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 RRM2P31350 389 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 CDKN2AP42771 156 aaKnown RBP21.47■■□□□ 1.03
VEGFA-232ENST00000640653 DVL1P1P54792 670 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-232ENST00000640653 ZMAT1Q5H9K5 638 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 USP51Q70EK9 711 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 VASH1Q7L8A9 365 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-232ENST00000640653 ZDHHC21Q8IVQ6 265 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 TMEM158Q8WZ71 300 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 ELMOD3Q96FG2 381 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 OR52D1Q9H346 318 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 TUBG2Q9NRH3 451 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 ASH2LQ9UBL3 628 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 TMEFF2Q9UIK5 374 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-232ENST00000640653 SVEP1Q4LDE5 3571 aa21.47■■□□□ 1.03
VEGFA-232ENST00000640653 IGHV1-46P01743 117 aa21.46■■□□□ 1.03
VEGFA-232ENST00000640653 HFEQ30201 348 aa21.46■■□□□ 1.03
VEGFA-232ENST00000640653 PGM2L1Q6PCE3 622 aa21.46■■□□□ 1.03
VEGFA-232ENST00000640653 JAZF1Q86VZ6 243 aa21.46■■□□□ 1.03
VEGFA-232ENST00000640653 EGLN1Q9GZT9 426 aa21.46■■□□□ 1.03
VEGFA-232ENST00000640653 POLR1DQ9Y2S0 133 aa21.46■■□□□ 1.03
VEGFA-232ENST00000640653 FBN1P35555 2871 aaKnown RBP21.45■■□□□ 1.02
VEGFA-232ENST00000640653 CLDN25C9JDP6 229 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 PHF1O43189 567 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-232ENST00000640653 MPZL1O95297 269 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 CENPAP49450 140 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 TMEM255AQ5JRV8 349 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 GLCCI1Q86VQ1 547 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 GNPDA2Q8TDQ7 276 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 COG8Q96MW5 612 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 DIRC2Q96SL1 478 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 TREM2Q9NZC2 230 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 ZDHHC8Q9ULC8 765 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 GRIP1Q9Y3R0 1128 aa21.45■■□□□ 1.02
VEGFA-232ENST00000640653 ZSCAN5BA6NJL1 495 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 WNT9BO14905 357 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 ARPC3O15145 178 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 TIMM8AO60220 97 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-232ENST00000640653 KRT36O76013 467 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms