RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 UCN3Q969E3 161 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 TMEM203Q969S6 136 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 CNRIP1Q96F85 164 aaPredicted RBP10.42□□□□□ -0.74
LINC00538-201ENST00000626109 TRMT61AQ96FX7 289 aaKnown RBP10.42□□□□□ -0.74
LINC00538-201ENST00000626109 BOD1Q96IK1 185 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 EGLN3Q9H6Z9 239 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 LANCL2Q9NS86 450 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 PLEKHB1Q9UF11 243 aaPredicted RBP10.42□□□□□ -0.74
LINC00538-201ENST00000626109 CASKO14936 926 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 PRAMEF2O60811 474 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CTNSO60931 367 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 EPPINO95925 133 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 PNMTP11086 282 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 ICAM2P13598 275 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 MMP9P14780 707 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FPR3P25089 353 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FOLR3P41439 243 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 RGS8P57771 180 aaPredicted RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 RPL23AP62750 156 aaKnown RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FUT5Q11128 374 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 STX4Q12846 297 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 DOC2BQ14184 412 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 ZFP69Q49AA0 526 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 LBHQ53QV2 105 aaPredicted RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TMEM81Q6P7N7 255 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SHISA6Q6ZSJ9 500 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 GTF3AQ92664 365 aaKnown RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TP53INP1Q96A56 240 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 GPA33Q99795 319 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 MTHFD2LQ9H903 347 aaPredicted RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CES1P1Q9UKY3 287 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SDK2Q58EX2 2172 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 A0A087WV48 116 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 MEIOCA2RUB1 952 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FAM90A8PA6NJQ4 464 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CPSF4LA6NMK7 179 aaKnown RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF785A8K8V0 405 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 IDSB3KWA1 339 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TEX22C9J3V5 150 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FGF17O60258 216 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 LDB3O75112 727 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 GPR75O95800 540 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FAM90A13PP0C7W8 464 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FAM90A24PP0C7X0 464 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CNR1P21554 472 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 BDKRB2P30411 391 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SOX18P35713 384 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 OMPP47874 163 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 RFX2P48378 723 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 RIDAP52758 137 aaKnown RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 GAS1P54826 345 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 AP3S2P59780 193 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TLE1Q04724 770 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CHRNEQ04844 493 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 HLXQ14774 488 aaPredicted RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 EIPR1Q53HC9 387 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 ATAD3CQ5T2N8 411 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 OR2G6Q5TZ20 316 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CD200R1LQ6Q8B3 271 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 NUDT10Q8NFP7 164 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 OR2Y1Q8NGV0 311 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 OR52P1PQ8NH57 321 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TMEM43Q9BTV4 400 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 PLA2G12AQ9BZM1 189 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 VN1R1Q9GZP7 353 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TOLLIPQ9H0E2 274 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SIRPDQ9H106 197 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SLC38A1Q9H2H9 487 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CTPS2Q9NRF8 586 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 GFOD1Q9NXC2 390 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TCFL5Q9UL49 500 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 FARSAQ9Y285 508 aaKnown RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SLC5A6Q9Y289 635 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 SF3B6Q9Y3B4 125 aaKnown RBP10.41□□□□□ -0.74
LINC00538-201ENST00000626109 TNFRSF18Q9Y5U5 241 aa10.41□□□□□ -0.74
LINC00538-201ENST00000626109 CFAP54Q96N23 3096 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 LOC101059948A0A1B0GTJ6 334 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 LRRN3E7EW58 273 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 BRI3O95415 125 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 RD3LP0DJH9 198 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 MAOAP21397 527 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 HSD11B1P28845 292 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 HTR1FP30939 366 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 NR4A2P43354 598 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 P2RY4P51582 365 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 RPS25P62851 125 aaKnown RBP10.4□□□□□ -0.74
LINC00538-201ENST00000626109 BTG2P78543 158 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 ID2Q02363 134 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 SERTAD2Q14140 314 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 EXT1Q16394 746 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 NXNL2Q5VZ03 156 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 TRIQKQ629K1 86 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 GID4Q8IVV7 300 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 OR4N5Q8IXE1 308 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 PLPP5Q8NEB5 264 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 OR2T33Q8NG76 320 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 FAM110DQ8TAY7 271 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms