RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LY6HO94772 140 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 AHSA1O95433 338 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 IL7P13232 177 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 COX5AP20674 150 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 RPS4Y1P22090 263 aaKnown RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 USF1P22415 310 aaPredicted RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 TACR3P29371 465 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 THBS2P35442 1172 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 CHRNA7P36544 502 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 RPS5P46782 204 aaKnown RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 GZMKP49863 264 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 FABP6P51161 128 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 MMP16P51512 607 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 PPP5CP53041 499 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 LSM11P83369 360 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPC6-202ENST00000617456 SPOCK1Q08629 439 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 MERTKQ12866 999 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ALKBH1Q13686 389 aaKnown RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 GGTLC2Q14390 218 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 HABP2Q14520 560 aaPredicted RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 HNF4GQ14541 408 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ODF1Q14990 250 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 MAPK14Q16539 360 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 MICBQ29980 383 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 FBXW9Q5XUX1 488 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ABLIM2Q6H8Q1 611 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 C11orf71Q6IPW1 123 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 FAM166AQ6J272 317 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SLC22A25Q6T423 547 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 CFAP77Q6ZQR2 320 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 OVCH2Q7RTZ1 564 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 TCTE3Q8IZS6 198 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 FBXL14Q8N1E6 418 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 PARP8Q8N3A8 854 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 MFSD4AQ8N468 514 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 PACRGLQ8N7B6 248 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ZNF614Q8N883 585 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ZNF511Q8NB15 262 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 DMBX1Q8NFW5 382 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 OR4M2Q8NGB6 313 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ZNF671Q8TAW3 534 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 PIGXQ8TBF5 258 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 C10orf105Q8TEF2 133 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 RAB2BQ8WUD1 216 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 C3orf49Q96BT1 292 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 DDIT4LQ96D03 193 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 MUCL1Q96DR8 90 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 OTUB1Q96FW1 271 aaPredicted RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 OR52E6Q96RD3 313 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 EFCAB1Q9HAE3 211 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SEBOXQ9HB31 216 aaPredicted RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 TREM1Q9NP99 234 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SDR39U1Q9NRG7 319 aaPredicted RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 CBLN4Q9NTU7 201 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 PNPOQ9NVS9 261 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ADPRHL2Q9NX46 363 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 NKIRAS1Q9NYS0 192 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 TMEM181Q9P2C4 612 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SVEP1Q4LDE5 3571 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 NPIPA5A0A0B4J1W7 369 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 ZNF716A6NP11 495 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 NPIPA7E9PJI5 369 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 RFXANKO14593 260 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 TCAPO15273 167 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 PRKYO43930 277 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 EDF1O60869 148 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 VAMP5O95183 116 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 CPSF4O95639 269 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 ALDOCP09972 364 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 NPIPA8P0DM63 369 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 IL7RP16871 459 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 HNF1AP20823 631 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 RPL35P42766 123 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 CRATP43155 626 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 ZNF83P51522 516 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 CCR4P51679 360 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 POLR2HP52434 150 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 UFM1P61960 85 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 RPS26P62854 115 aaKnown RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 SLC35A1P78382 337 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 DEFA6Q01524 100 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 IFITM3Q01628 133 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 FUT5Q11128 374 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 ASAH1Q13510 395 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 CARTPTQ16568 116 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 GPAT3Q53EU6 434 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 Q5BKY6 102 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 LRFN4Q6PJG9 635 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 ZNF621Q6ZSS3 439 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 DPPA2Q7Z7J5 298 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 CARM1Q86X55 608 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 RNF130Q86XS8 419 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 MUC15Q8N387 334 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 LNX2Q8N448 690 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 C17orf78Q8N4C9 275 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 C1orf162Q8NEQ5 155 aaPredicted RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 ZNF563Q8TA94 476 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 ZG16BQ96DA0 208 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms