RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ZNF593O00488 134 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 LCKP06239 509 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 PSKH1P11801 424 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF823P16415 610 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ALOX5APP20292 161 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 CEACAM8P31997 349 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 TTKP33981 857 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 GUCA1AP43080 201 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 KIR2DL2P43627 348 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ART1P52961 327 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 SH3BGRP55822 239 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ROR2Q01974 943 aaKnown RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 BDH1Q02338 343 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 EGR3Q06889 387 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ACSM1Q08AH1 577 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 SPHARQ15513 63 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 HSPB2Q16082 182 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 CEACAM16Q2WEN9 425 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 SLC18B1Q6NT16 456 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 XKRXQ6PP77 449 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 TMPRSS11AQ6ZMR5 421 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 C3P1Q6ZMU1 363 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 SSX6Q7RTT6 188 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 DPY19L4Q7Z388 723 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 LHFPL3Q86UP9 236 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 GCNT2Q8N0V5 402 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 RFLNBQ8N5W9 214 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ASB17Q8WXJ9 295 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 C14orf79Q96F83 325 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 COG8Q96MW5 612 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 FOXN4Q96NZ1 517 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 TBX5Q99593 518 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 FOXB1Q99853 325 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 WACQ9BTA9 647 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 RBM24Q9BX46 236 aaKnown RBP10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ISYNA1Q9NPH2 558 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 TMEM38BQ9NVV0 291 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 CYB5R1Q9UHQ9 305 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 LAMP5Q9UJQ1 280 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 TMCC2O75069 709 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 TNFSF13O75888 250 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 KRT33AO76009 404 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SEC14L2O76054 403 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 TOXO94900 526 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 INMTO95050 263 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 MPZL1O95297 269 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 CLDN14O95500 239 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 IL2RAP01589 272 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SCG5P05408 212 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SPARCP09486 303 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 TMIGD3P0DMS9 266 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-212ENST00000613856 GLI4P10075 376 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 CDAP32320 146 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 GP2P55259 537 aaKnown RBP10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SIRPAP78324 504 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 ROM1Q03395 351 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 MLLT11Q13015 90 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-212ENST00000613856 RAB39AQ14964 217 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 MEP1BQ16820 701 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF684Q5T5D7 378 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 OR2G6Q5TZ20 316 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 FAM27BQ5VT28 67 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 FBXW9Q5XUX1 488 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.03□□□□□ -0.8
SLIRP-212ENST00000613856 ACBD4Q8NC06 268 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 OR13F1Q8NGS4 319 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 OR52N5Q8NH56 324 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 HAVCR2Q8TDQ0 301 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SMAP2Q8WU79 429 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF837Q96EG3 531 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-212ENST00000613856 OR5M11Q96RB7 305 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 TTYH2Q9BSA4 534 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SFXN3Q9BWM7 321 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 C12orf49Q9H741 205 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SEC61A2Q9H9S3 476 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 UPB1Q9UBR1 384 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 KLHDC2Q9Y2U9 406 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 LHFPL6Q9Y693 200 aa10.03□□□□□ -0.8
SLIRP-212ENST00000613856 ABCA2Q9BZC7 2435 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 PRR32B1ATL7 298 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 SULT1C4O75897 302 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 ABHD16AO95870 558 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 IL18BPO95998 194 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 CGAP01215 116 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 IGHV3-9P01782 118 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 MT-ND5P03915 603 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 CST2P09228 141 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 CD8BP10966 210 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 PSMB9P28065 219 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 MPGP29372 298 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 CD79BP40259 229 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 HCCSP53701 268 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 FOXF2Q12947 444 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 MRPL28Q13084 256 aaKnown RBP10.02□□□□□ -0.81
SLIRP-212ENST00000613856 AQP6Q13520 282 aa10.02□□□□□ -0.81
SLIRP-212ENST00000613856 EIF2B1Q14232 305 aaKnown RBP10.02□□□□□ -0.81
SLIRP-212ENST00000613856 ENDOGQ14249 297 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms