RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CLUP10909 449 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 ACP2P11117 423 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 PPP3CBP16298 524 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CSNK1A1P48729 337 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SLC25A35Q3KQZ1 300 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 HEPHL1Q6MZM0 1159 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 DPY19L4Q7Z388 723 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 GLB1L2Q8IW92 636 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 ACBD7Q8N6N7 88 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CT55Q8WUE5 264 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 FCAMRQ8WWV6 532 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 MARVELD3Q96A59 401 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 NTMQ9P121 344 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SLC35A3Q9Y2D2 325 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 A0A1W2PRQ8 180 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 OR2T1O43869 369 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 TGM6O95932 706 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 PPIAP62937 165 aaKnown RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ILKQ13418 452 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 CRMP1Q14194 572 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 TMEM69Q5SWH9 247 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 GLT8D1Q68CQ7 371 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 QSOX2Q6ZRP7 698 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SSX9Q7RTT3 188 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF615Q8N8J6 731 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 WDSUB1Q8N9V3 476 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 OR5T2Q8NGG2 359 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF417Q8TAU3 575 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF587Q96SQ5 575 aaPredicted RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 LYRM4Q9HD34 91 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 DOCK10Q96BY6 2186 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SPTBN5Q9NRC6 3674 aaKnown RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 MEIKINA0A087WXM9 373 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 A0A1B0GV50 99 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 F5H5P2 479 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 KLRC4-KLRK1H3BQV0 150 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SPP1P10451 314 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 S1PR1P21453 382 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HTR2AP28223 471 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 EMDP50402 254 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 POU4F2Q12837 409 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HLXQ14774 488 aaPredicted RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 GSG1Q2KHT4 349 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 WBP2NLQ6ICG8 309 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF836Q6ZNA1 936 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 OR1M1Q8NGA1 313 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SAP25Q8TEE9 199 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ALG8Q9BVK2 526 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 NEUROG3Q9Y4Z2 214 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 TRBV5-3A0A0A0MS03 114 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 IGKV1-8A0A0C4DH67 115 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ANKRD61A6NGH8 418 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SOCS6O14544 535 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 VAMP1P23763 118 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HOXA1P49639 335 aaPredicted RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HCCSP53701 268 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 RAP2BP61225 183 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ACSM3Q53FZ2 586 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF425Q6IV72 752 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 GTPBP8Q8N3Z3 284 aaPredicted RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 TMEM178AQ8NBL3 297 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 OR4D9Q8NGE8 314 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 OR5D18Q8NGL1 313 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 FAM46BQ96A09 425 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 PRRC1Q96M27 445 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SIGLEC11Q96RL6 698 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ISG20L2Q9H9L3 353 aaKnown RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 KLK11Q9UBX7 282 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 MEX3AA1L020 520 aaKnown RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 C5orf51A6NDU8 294 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 C17orf51A8MQB3 221 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 CXCL2P19875 107 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ELAVL4P26378 380 aaKnown RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ABCD3P28288 659 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 TRHRP34981 398 aaPredicted RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 GZMMP51124 257 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SELENOVP59797 346 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 RAB40BQ12829 278 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 MLC1Q15049 377 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 KLHL26Q53HC5 615 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ACER2Q5QJU3 275 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HBMQ6B0K9 141 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 USP34Q70CQ2 3546 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 INO80EQ8NBZ0 244 aaPredicted RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 ARL5BQ96KC2 179 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SHARPINQ9H0F6 387 aa9.82□□□□□ -0.84
FAM3A-221ENST00000612856 SIDT1Q9NXL6 827 aaKnown RBP9.82□□□□□ -0.84
FAM3A-221ENST00000612856 HEATR5BQ9P2D3 2071 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TANC1Q9C0D5 1861 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 H0YIG0 161 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TACSTD2P09758 323 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 MMP11P24347 488 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 BAMBIQ13145 260 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 OR10R2Q8NGX6 335 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 HSD17B8Q92506 261 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms