RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ZNF281Q9Y2X9 895 aa7.89□□□□□ -1.15
CCDC47-207ENST00000612558 MSRB2Q9Y3D2 182 aa7.89□□□□□ -1.15
CCDC47-207ENST00000612558 CASKO14936 926 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 TFECO14948 347 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 DHHO43323 396 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 SLC43A1O75387 559 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZFPL1O95159 310 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CPN1P15169 458 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 S100A5P33763 92 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 OPRL1P41146 370 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 MTNR1BP49286 362 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 SELENOPP49908 381 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 RIDAP52758 137 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 MXD1Q05195 221 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF829Q3KNS6 432 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 YIF1BQ5BJH7 314 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF544Q6NX49 715 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 LRRN1Q6UXK5 716 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CHMP1BQ7LBR1 199 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 AAED1Q7RTV5 226 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 LINC00346Q8IVM7 164 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 OR2AJ1Q8NGZ0 328 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 OR5AK2Q8NH90 309 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ST7LQ8TDW4 575 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 HSD17B8Q92506 261 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PHYHIPQ92561 330 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 MAP6Q96JE9 813 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PDCD1LG2Q9BQ51 273 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 BARHL1Q9BZE3 327 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 C1orf198Q9H425 327 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PLGRKTQ9HBL7 147 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 HMG20AQ9NP66 347 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 FRRS1LQ9P0K9 344 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CRNNQ9UBG3 495 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 MCTS1Q9ULC4 181 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 UGT2A1Q9Y4X1 527 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PCDHGA9Q9Y5G4 932 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PEX16Q9Y5Y5 336 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ASPMQ8IZT6 3477 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 AKAP13Q12802 2813 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 NCOA6Q14686 2063 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZFHX4Q86UP3 3567 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 IGKV3D-15A0A087WSY6 115 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 IQCMA0A1B0GVH7 501 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 TMEM212A6NML5 194 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CLDN25C9JDP6 229 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 GPR171O14626 319 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ARL6IP5O75915 188 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CLEC2LP0C7M8 214 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF24P17028 368 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CALRP27797 417 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CDAP32320 146 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF84P51523 738 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 CCR9P51686 369 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 RPS11P62280 158 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 LSM6P62312 80 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 HNRNPA0Q13151 305 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 DCTN2Q13561 401 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF846Q147U1 533 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ZMAT1Q5H9K5 638 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PHYHD1Q5SRE7 291 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 UNQ9370/PRO34162Q6UXP9 181 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 C8orf86Q6ZUL3 223 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 FOXL2NBQ6ZUU3 175 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 RHOUQ7L0Q8 258 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 TPRA1Q86W33 373 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 OR2G2Q8NGZ5 317 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ABHD3Q8WU67 409 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 RNF133Q8WVZ7 376 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 AP3S1Q92572 193 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 TMEM45BQ96B21 275 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 KCNS3Q9BQ31 491 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 PRRG4Q9BZD6 226 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ULBP2Q9BZM5 246 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 WDR12Q9GZL7 423 aaKnown RBP7.88□□□□□ -1.15
CCDC47-207ENST00000612558 COMMD4Q9H0A8 199 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 NELFAQ9H3P2 528 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 EMC7Q9NPA0 242 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 B3GAT2Q9NPZ5 323 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 AKIP1Q9NQ31 210 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 POLE4Q9NR33 117 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 POLR1DQ9Y2S0 133 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 LRP12Q9Y561 859 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 LIPGQ9Y5X9 500 aa7.88□□□□□ -1.15
CCDC47-207ENST00000612558 ARPC4-TTLL3A0A0A6YYG9 625 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 TRAV1-2A0A0B4J238 106 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 SHISA3A0PJX4 238 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 OR4C45A6NMZ5 311 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF879B4DU55 563 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 DVL2O14641 736 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 IGHG3P01860 377 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 UCHL1P09936 223 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 H2BFMP0C1H6 154 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 MSR1P21757 451 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 MYL9P24844 172 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 NTF4P34130 210 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 PMP22Q01453 160 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 RNPS1Q15287 305 aaKnown RBP7.87□□□□□ -1.15
CCDC47-207ENST00000612558 SGCAQ16586 387 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms