RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	C1QL3	Q5VWW1	255 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	PRSS45	Q7RTY3	260 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	IZUMO1	Q8IYV9	350 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	FCAMR	Q8WWV6	532 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	IMMP1L	Q96LU5	166 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	INTS14	Q96SY0	518 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	AIFM2	Q9BRQ8	373 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	SYT4	Q9H2B2	425 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	ZNF160	Q9HCG1	818 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	NKIRAS2	Q9NYR9	191 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	GLS2	Q9UI32	602 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	IKZF2	Q9UKS7	526 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614	TMEM14A	Q9Y6G1	99 aa		12.46	□□□□□ -0.42
COPS7B-223	ENST00000611614		A0A087WV48	116 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614		L7N2F9	121 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	PHYH	O14832	338 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	ACSM4	P0C7M7	580 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	ALOX5AP	P20292	161 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	FBXW4	P57775	412 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	PM20D2	Q8IYS1	436 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	FAM117A	Q9C073	453 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	TCF7L1	Q9HCS4	588 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	MUC6	Q6W4X9	2439 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	ANKRD20A5P	A0PJZ0	165 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	XKRY	O14609	159 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	GMDS	O60547	372 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	RAD1	O60671	282 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	KHDRBS3	O75525	346 aa	Known RBP	12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	B3GALNT1	O75752	331 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	ZNF432	O94892	652 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR2A4	O95047	310 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	ADRB1	P08588	477 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	HOXD4	P09016	255 aa	Predicted RBP	12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	CALCB	P10092	127 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	VEGFC	P49767	419 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	P2RX1	P51575	399 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	POLR2H	P52434	150 aa	Known RBP	12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	SGCB	Q16585	318 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	PXDC1	Q5TGL8	231 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	FAM122C	Q6P4D5	195 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	STAC2	Q6ZMT1	411 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614		Q6ZTK2	550 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	FCRLA	Q7L513	359 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	DPY19L4	Q7Z388	723 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	MEIOB	Q8N635	442 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR52I2	Q8NH67	350 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	SLC25A36	Q96CQ1	311 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	SLC25A38	Q96DW6	304 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	SFXN2	Q96NB2	322 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR2A7	Q96R45	310 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	PTDSS2	Q9BVG9	487 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	PIPOX	Q9P0Z9	390 aa		12.45	□□□□□ -0.42
COPS7B-223	ENST00000611614	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	MFSD2B	A6NFX1	497 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	TMEM200C	A6NKL6	621 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	HSPB2	A8KAH6	182 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	KRBOX1	C9JBD0	128 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	C11orf98	E9PRG8	122 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	SUSD5	O60279	629 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	FADS1	O60427	444 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	CREBL2	O60519	120 aa	Predicted RBP	12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	DKK1	O94907	266 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	GABRE	P78334	506 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	HSPB2	Q16082	182 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	IL22RA1	Q8N6P7	574 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR2G2	Q8NGZ5	317 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	THEM6	Q8WUY1	208 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	NSMAF	Q92636	917 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	WBP1	Q96G27	269 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	REG4	Q9BYZ8	158 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR10A4	Q9H209	315 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	BEX1	Q9HBH7	125 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	SDHAF3	Q9NRP4	125 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	SDHAF2	Q9NX18	166 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	KLRF1	Q9NZS2	232 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	TMED7	Q9Y3B3	224 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR2M5	A3KFT3	312 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	OR4C45	A6NMZ5	311 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	ACOT7	O00154	380 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	TP53I11	O14683	189 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	ARPC1B	O15143	372 aa	Known RBP	12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	NPIPB7	O75200	414 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	WISP1	O95388	367 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	ALDOB	P05062	364 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	CEACAM1	P13688	526 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	CALCR	P30988	508 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	C17orf67	Q0P5P2	114 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	RIF1	Q5UIP0	2472 aa	Known RBP	12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	ZNF626	Q68DY1	528 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	OPN5	Q6U736	354 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	CHMP1B	Q7LBR1	199 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	OVCH2	Q7RTZ1	564 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	GPR119	Q8TDV5	335 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	DUSP19	Q8WTR2	217 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	DNAJA3	Q96EY1	480 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	ELMOD3	Q96FG2	381 aa		12.44	□□□□□ -0.42
COPS7B-223	ENST00000611614	S100A16	Q96FQ6	103 aa	Known RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms